RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 OSTF1Q92882 214 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 HIST1H2ACQ93077 130 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 KTI12Q96EK9 354 aaPredicted RBP13.96□□□□□ -0.17
UPF1-206ENST00000598471 SFXN2Q96NB2 322 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 GPA33Q99795 319 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 TAPBPLQ9BX59 468 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 TEX12Q9BXU0 123 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 GRIP2Q9C0E4 1043 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 FKRPQ9H9S5 495 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 NANSQ9NR45 359 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 TBC1D23Q9NUY8 699 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 REV1Q9UBZ9 1251 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 ZNF229Q9UJW7 825 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 CSAG2Q9Y5P2 127 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 GMPPBQ9Y5P6 360 aa13.96□□□□□ -0.17
UPF1-206ENST00000598471 LOC100130705A0A1B0GUX0 176 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 FAM166BA8MTA8 275 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 H3BML4 177 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 CDC42EP2O14613 210 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 SLC16A6O15403 523 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 SOX14O95416 240 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 HPNP05981 417 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 BMP7P18075 431 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 FUT1P19526 365 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 CHMP24386 653 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 RFC3P40938 356 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 RPS5P46782 204 aaKnown RBP13.95□□□□□ -0.18
UPF1-206ENST00000598471 IL18R1Q13478 541 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 MED21Q13503 144 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 KEAP1Q14145 624 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 ANKDD1AQ495B1 522 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 ZBED5Q49AG3 693 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 MAMDC2Q7Z304 686 aaPredicted RBP13.95□□□□□ -0.18
UPF1-206ENST00000598471 YRDCQ86U90 279 aaKnown RBP13.95□□□□□ -0.18
UPF1-206ENST00000598471 FAM109AQ8N4B1 249 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 TMEM251Q8N6I4 163 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 SETD9Q8NE22 299 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 OR5M1Q8NGP8 315 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 LIPHQ8WWY8 451 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 EXTL1Q92935 676 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 TAAR8Q969N4 342 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 NPAS1Q99742 590 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 APOL4Q9BPW4 351 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 ARHGAP9Q9BRR9 750 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 ANKRD60Q9BZ19 345 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 PRRG3Q9BZD7 231 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 OR11A1Q9GZK7 315 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 PRORYQ9H606 182 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 LRCH1Q9Y2L9 728 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 HDGFL3Q9Y3E1 203 aa13.95□□□□□ -0.18
UPF1-206ENST00000598471 ZC3H12DA2A288 527 aaKnown RBP13.94□□□□□ -0.18
UPF1-206ENST00000598471 DENRO43583 198 aaKnown RBP13.94□□□□□ -0.18
UPF1-206ENST00000598471 PEPDP12955 493 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 MAGEA5P43359 124 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 RAC1P63000 192 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 CMPK2Q5EBM0 449 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 WIPI1Q5MNZ9 446 aaPredicted RBP13.94□□□□□ -0.18
UPF1-206ENST00000598471 SMARCD3Q6STE5 483 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 Q6ZS92 163 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 SLC46A3Q7Z3Q1 461 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 NANOGNBQ7Z5D8 188 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 OR13C2Q8NGS9 318 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 MFSD8Q8NHS3 518 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 ZNF570Q96NI8 536 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 PITX2Q99697 317 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 PTDSS2Q9BVG9 487 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 ASPNQ9BXN1 380 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 ADNPQ9H2P0 1102 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 OR52D1Q9H346 318 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 SIGLEC7Q9Y286 467 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 CORINQ9Y5Q5 1042 aa13.94□□□□□ -0.18
UPF1-206ENST00000598471 EML6Q6ZMW3 1958 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 TFECO14948 347 aaPredicted RBP13.93□□□□□ -0.18
UPF1-206ENST00000598471 WISP1O95388 367 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 BGLAPP02818 100 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 ZNF24P17028 368 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 IL11P20809 199 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 SLC6A6P31641 620 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 POLR2IP36954 125 aaKnown RBP13.93□□□□□ -0.18
UPF1-206ENST00000598471 SMSP52788 366 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 B3GALT5-AS1P59052 145 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 PRPS1P60891 318 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 CDC42P60953 191 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 SLC10A1Q14973 349 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 PTGES3Q15185 160 aaKnown RBP13.93□□□□□ -0.18
UPF1-206ENST00000598471 INAQ16352 499 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 KRT80Q6KB66 452 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 SLC27A4Q6P1M0 643 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 KIF18BQ86Y91 864 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 C8orf59Q8N0T1 100 aaPredicted RBP13.93□□□□□ -0.18
UPF1-206ENST00000598471 DEPDC4Q8N2C3 294 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 OR51A7Q8NH64 312 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 SMPDL3BQ92485 455 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 SLC25A36Q96CQ1 311 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 ABHD17AQ96GS6 310 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 HRASLS5Q96KN8 279 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 CNBD2Q96M20 576 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 OR5B2Q96R09 309 aa13.93□□□□□ -0.18
UPF1-206ENST00000598471 UBL7Q96S82 380 aaPredicted RBP13.93□□□□□ -0.18
UPF1-206ENST00000598471 TSSK6Q9BXA6 273 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms