RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 DUSP7Q16829 419 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 PAQR6Q6TCH4 344 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 CCDC80Q76M96 950 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 PATL1Q86TB9 770 aaKnown RBP18.71■□□□□ 0.59
PNKP-209ENST00000596726 CDC20BQ86Y33 519 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 POU5F2Q8N7G0 328 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 STK35Q8TDR2 534 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 ZNF775Q96BV0 537 aaPredicted RBP18.71■□□□□ 0.59
PNKP-209ENST00000596726 NAA11Q9BSU3 229 aaPredicted RBP18.71■□□□□ 0.59
PNKP-209ENST00000596726 TRIM2Q9C040 744 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 OR10A4Q9H209 315 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 KLHL28Q9NXS3 571 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 TESQ9UGI8 421 aaKnown RBP18.71■□□□□ 0.59
PNKP-209ENST00000596726 AKAP9Q99996 3911 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 PRR14LQ5THK1 2151 aa18.71■□□□□ 0.59
PNKP-209ENST00000596726 AKAP6Q13023 2319 aa18.71■□□□□ 0.58
PNKP-209ENST00000596726 OTOGQ6ZRI0 2925 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 A0A1B0GWA3 101 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 CASKO14936 926 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 TPST2O60704 377 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 LGI1O95970 557 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 HRGP04196 525 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 GPIP06744 558 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 C8BP07358 591 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 EDNRAP25101 427 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 INTS11Q5TA45 600 aaKnown RBP18.7■□□□□ 0.58
PNKP-209ENST00000596726 GALNT5Q7Z7M9 940 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 SMYD1Q8NB12 490 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 GPR32P1Q8NGA4 272 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 OR52E4Q8NGH9 312 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 RCN3Q96D15 328 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 ZNF583Q96ND8 569 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 ARHGDIGQ99819 225 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 ECSITQ9BQ95 431 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 MED18Q9BUE0 208 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 PRR14Q9BWN1 585 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 PIF1Q9H611 641 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 EMC3Q9P0I2 261 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 GPR52Q9Y2T5 361 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 MYO9AB2RTY4 2548 aa18.7■□□□□ 0.58
PNKP-209ENST00000596726 OPN1SWP03999 348 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 COX4I1P13073 169 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 PPP3CBP16298 524 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 CRYGSP22914 178 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 NTF4P34130 210 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 CRYBA2P53672 197 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 GYS2P54840 703 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 RGS8P57771 180 aaPredicted RBP18.69■□□□□ 0.58
PNKP-209ENST00000596726 EGR4Q05215 589 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 OR7A5Q15622 319 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 NRF1Q16656 503 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 C1orf140Q5VVS0 124 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 ANKRD34AQ69YU3 496 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 CDH24Q86UP0 819 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 CXorf67Q86X51 503 aaPredicted RBP18.69■□□□□ 0.58
PNKP-209ENST00000596726 TREML1Q86YW5 311 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 DNAJA4Q8WW22 397 aaPredicted RBP18.69■□□□□ 0.58
PNKP-209ENST00000596726 TAMM41Q96BW9 452 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 MYLK2Q9H1R3 596 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 ZNF226Q9NYT6 803 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 RPS6KB2Q9UBS0 482 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 SLC13A4Q9UKG4 626 aa18.69■□□□□ 0.58
PNKP-209ENST00000596726 GMNCA6NCL1 334 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 DYNC1I1O14576 645 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 GPR171O14626 319 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 SIAH2O43255 324 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 SNX3O60493 162 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 FZD7O75084 574 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 THBDP07204 575 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 CD247P20963 164 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 VEZF1Q14119 521 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 SLC17A1Q14916 467 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 OR1Q1Q15612 314 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 SFRP5Q5T4F7 317 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 FAM91A1Q658Y4 838 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 ULK3Q6PHR2 472 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 Q6ZT83 130 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 TMEM99Q8N816 258 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 NRGNQ92686 78 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 SLC38A4Q969I6 547 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 PTDSS2Q9BVG9 487 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 HDHD5Q9BXW7 423 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 NSRP1Q9H0G5 558 aaKnown RBP18.68■□□□□ 0.58
PNKP-209ENST00000596726 PRSS50Q9UI38 385 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 USP22Q9UPT9 525 aa18.68■□□□□ 0.58
PNKP-209ENST00000596726 NOSIPQ9Y314 301 aaKnown RBP18.68■□□□□ 0.58
PNKP-209ENST00000596726 AQP7P3A6NL99 342 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 ELOA3DA6NLF2 546 aaPredicted RBP18.67■□□□□ 0.58
PNKP-209ENST00000596726 DEFB108AA8MXU0 73 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 FTCDNL1E5RQL4 147 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 FMO6PO60774 539 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 AKR7A3O95154 331 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 CNOT4O95628 575 aaKnown RBP18.67■□□□□ 0.58
PNKP-209ENST00000596726 ADAP00813 363 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 PNMTP11086 282 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 P2RY4P51582 365 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 P2RY6Q15077 328 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 ELOA3BQ3SY89 546 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 ALG10BQ5I7T1 473 aa18.67■□□□□ 0.58
PNKP-209ENST00000596726 OTUD3Q5T2D3 398 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms