RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 VNN3Q9NY84 501 aa9.45□□□□□ -0.9
LIG1-210ENST00000596332 RHCGQ9UBD6 479 aa9.45□□□□□ -0.9
LIG1-210ENST00000596332 Q9UFV3 132 aa9.45□□□□□ -0.9
LIG1-210ENST00000596332 HDGFL3Q9Y3E1 203 aa9.45□□□□□ -0.9
LIG1-210ENST00000596332 V9GYQ6 96 aa9.45□□□□□ -0.9
LIG1-210ENST00000596332 FASNP49327 2511 aaKnown RBP9.45□□□□□ -0.9
LIG1-210ENST00000596332 A0A087WUU8 490 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 IGHV3-15A0A0B4J1V0 119 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 ZNF716A6NP11 495 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 FAM47E-STBD1D6RA91 191 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 H0Y3Z8 333 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 TNFSF13O75888 250 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 RCBTB2O95199 551 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 CGAP01215 116 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 IFNW1P05000 195 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 TSPAN19P0C672 248 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 THRBP10828 461 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 PNMTP11086 282 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 UQCRBP14927 111 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 EDNRAP25101 427 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 FKBP2P26885 142 aaKnown RBP9.44□□□□□ -0.9
LIG1-210ENST00000596332 PTGER4P35408 488 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 TIMP3P35625 211 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 KIR2DL2P43627 348 aaPredicted RBP9.44□□□□□ -0.9
LIG1-210ENST00000596332 EIF1AXP47813 144 aaKnown RBP9.44□□□□□ -0.9
LIG1-210ENST00000596332 ERFP50548 548 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 HMGA2P52926 109 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 PON3Q15166 354 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 SEC23BQ15437 767 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 MTX3Q5HYI7 312 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 RIPPLY2Q5TAB7 128 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 C1orf140Q5VVS0 124 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 B3GNT6Q6ZMB0 384 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 FKBP9P1Q75LS8 142 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 SLC46A3Q7Z3Q1 461 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 CCDC103Q8IW40 242 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 WDFY1Q8IWB7 410 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 OFCC1Q8IZS5 231 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 MEIOBQ8N635 442 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 ZIC4Q8N9L1 334 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 SLC7A13Q8TCU3 470 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 RNF128Q8TEB7 428 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 DUS3LQ96G46 650 aaKnown RBP9.44□□□□□ -0.9
LIG1-210ENST00000596332 MOGAT1Q96PD6 335 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 SEPHS2Q99611 448 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 CACYBPQ9HB71 228 aaKnown RBP9.44□□□□□ -0.9
LIG1-210ENST00000596332 SERINC1Q9NRX5 453 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 C20orf141Q9NUB4 165 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 SLC13A4Q9UKG4 626 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 RNF6Q9Y252 685 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 SLC5A6Q9Y289 635 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 ZNF175Q9Y473 711 aa9.44□□□□□ -0.9
LIG1-210ENST00000596332 UTP20O75691 2785 aaKnown RBP9.43□□□□□ -0.9
LIG1-210ENST00000596332 TRBV4-1A0A0J9YWV2 114 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 A0A1B0GUH1 482 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 FIGNL2A6NMB9 653 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 MS4A18H0YCH9 400 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 PIP5K1CO60331 668 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 ZG16O60844 167 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 MT-ND1P03886 318 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 RHCEP18577 417 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 FPR1P21462 350 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 RPS5P46782 204 aaKnown RBP9.43□□□□□ -0.9
LIG1-210ENST00000596332 MS4A18Q3C1V0 323 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 ABLIM2Q6H8Q1 611 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 CCDC71Q8IV32 467 aaPredicted RBP9.43□□□□□ -0.9
LIG1-210ENST00000596332 ZDHHC21Q8IVQ6 265 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 LRRC17Q8N6Y2 441 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 TMEM99Q8N816 258 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 OR4C15Q8NGM1 316 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 OR6S1Q8NH40 331 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 PFN4Q8NHR9 129 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 MFSD8Q8NHS3 518 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 ITLN2Q8WWU7 325 aaPredicted RBP9.43□□□□□ -0.9
LIG1-210ENST00000596332 LIPHQ8WWY8 451 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 DDIT4LQ96D03 193 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 MPP4Q96JB8 637 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 GPA33Q99795 319 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 PSD2Q9BQI7 771 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 MAGIXQ9H6Y5 334 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 CCM2LQ9NUG4 571 aaPredicted RBP9.43□□□□□ -0.9
LIG1-210ENST00000596332 B3GAT1Q9P2W7 334 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 RPS6KB2Q9UBS0 482 aa9.43□□□□□ -0.9
LIG1-210ENST00000596332 PHF3Q92576 2039 aaKnown RBP9.43□□□□□ -0.9
LIG1-210ENST00000596332 DOPEY1Q5JWR5 2465 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 TRAV36DV7A0A075B6V5 113 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 A0A1W2PRQ8 180 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 ELOA3DA6NLF2 546 aaPredicted RBP9.42□□□□□ -0.9
LIG1-210ENST00000596332 GJE1A6NN92 205 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 SULT2B1O00204 365 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 KLF4O43474 513 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 DNPH1O43598 174 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 CYTIPO60759 359 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 HPRP00739 348 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 IGF2P01344 180 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 TFPIP10646 304 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 ZNF26P17031 533 aaPredicted RBP9.42□□□□□ -0.9
LIG1-210ENST00000596332 FUT1P19526 365 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 MAKP20794 623 aa9.42□□□□□ -0.9
LIG1-210ENST00000596332 GCKP35557 465 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms