RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 FKBP2P26885 142 aaKnown RBP9.9□□□□□ -0.82
VRK3-210ENST00000596121 SLC7A2P52569 658 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 RGS8P57771 180 aaPredicted RBP9.9□□□□□ -0.82
VRK3-210ENST00000596121 CSNK2A1P68400 391 aaPredicted RBP9.9□□□□□ -0.82
VRK3-210ENST00000596121 SORDQ00796 357 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 LIPEQ05469 1076 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 CEACAM7Q14002 265 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 VEZF1Q14119 521 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 EXOC3L2Q2M3D2 409 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 C1orf140Q5VVS0 124 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 ANKRD34AQ69YU3 496 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 GTF2IRD2BQ6EKJ0 949 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 C6orf89Q6UWU4 347 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 TFAP2EQ6VUC0 442 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 HACD2Q6Y1H2 254 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 GDF7Q7Z4P5 450 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 PATL1Q86TB9 770 aaKnown RBP9.9□□□□□ -0.82
VRK3-210ENST00000596121 GTF2IRD2Q86UP8 949 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 SLC30A8Q8IWU4 369 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 SLC43A2Q8N370 569 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 TMEM99Q8N816 258 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 ZIC4Q8N9L1 334 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 TAAR8Q969N4 342 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 DDIT4LQ96D03 193 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 KTI12Q96EK9 354 aaPredicted RBP9.9□□□□□ -0.82
VRK3-210ENST00000596121 WFIKKN1Q96NZ8 548 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 ZNF559Q9BR84 538 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 TRIM2Q9C040 744 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 EFCAB1Q9HAE3 211 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 MCCC2Q9HCC0 563 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 GP6Q9HCN6 339 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 SEC14L4Q9UDX3 406 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 PRSS50Q9UI38 385 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 ARL2BPQ9Y2Y0 163 aa9.9□□□□□ -0.82
VRK3-210ENST00000596121 TUBAL3A6NHL2 446 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 ZNF724A8MTY0 619 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 SIAH2O43255 324 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 DNPH1O43598 174 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 CTAG2O75638 210 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 AKR7A3O95154 331 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 THBDP07204 575 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 EPXP11678 715 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 POU2F1P14859 743 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 PTNP21246 168 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 FUT4P22083 530 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 PRDX6P30041 224 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 SSTR2P30874 369 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 IDUAP35475 653 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 UGT2B10P36537 528 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 PCYT1AP49585 367 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 GSK3BP49841 420 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 NUDT2P50583 147 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 MAP2K6P52564 334 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 SLC16A1P53985 500 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 CDH12P55289 794 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 PSME3P61289 254 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 SLC35A1P78382 337 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 LTBQ06643 244 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 DAZAP2Q15038 168 aaPredicted RBP9.89□□□□□ -0.83
VRK3-210ENST00000596121 PDK3Q15120 406 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 OR7A5Q15622 319 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 TSC22D1Q15714 1073 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 TMEM201Q5SNT2 666 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 LINC00114Q6XXX2 140 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 STAC2Q6ZMT1 411 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 WDR88Q6ZMY6 472 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 KIF18BQ86Y91 864 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 MICU2Q8IYU8 434 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 BHLHE22Q8NFJ8 381 aaPredicted RBP9.89□□□□□ -0.83
VRK3-210ENST00000596121 OR2T12Q8NG77 320 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 VANGL1Q8TAA9 524 aaPredicted RBP9.89□□□□□ -0.83
VRK3-210ENST00000596121 STK35Q8TDR2 534 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 FAM222BQ8WU58 562 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 SLC38A4Q969I6 547 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 LRRC46Q96FV0 321 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 LURAP1Q96LR2 239 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 MCHR1Q99705 422 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 HOPXQ9BPY8 73 aaPredicted RBP9.89□□□□□ -0.83
VRK3-210ENST00000596121 KLHL28Q9NXS3 571 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 ELOVL5Q9NYP7 299 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 KLHL9Q9P2J3 617 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 TESQ9UGI8 421 aaKnown RBP9.89□□□□□ -0.83
VRK3-210ENST00000596121 TESMINQ9Y4I5 508 aa9.89□□□□□ -0.83
VRK3-210ENST00000596121 A0A087WUJ7 227 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 A0A1W2PPR1 153 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 ELOVL7A1L3X0 281 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 SH3D21A4FU49 640 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 ELOA3DA6NLF2 546 aaPredicted RBP9.88□□□□□ -0.83
VRK3-210ENST00000596121 C16orf97H3BN30 126 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 SHOX2O60902 331 aaPredicted RBP9.88□□□□□ -0.83
VRK3-210ENST00000596121 FZD7O75084 574 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 KDELR2P33947 212 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 RPS5P46782 204 aaKnown RBP9.88□□□□□ -0.83
VRK3-210ENST00000596121 OR3A2P47893 321 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 FOXG1P55316 489 aaPredicted RBP9.88□□□□□ -0.83
VRK3-210ENST00000596121 SLC17A1Q14916 467 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 ELOA3BQ3SY89 546 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 CYBRD1Q53TN4 286 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 ALG10BQ5I7T1 473 aa9.88□□□□□ -0.83
VRK3-210ENST00000596121 ENTPD8Q5MY95 495 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms