RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 THOC3Q96J01 351 aaKnown RBP12.03□□□□□ -0.48
VRK3-205ENST00000593919 Q96MT0 163 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 IP6K3Q96PC2 410 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 UCN2Q96RP3 112 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 CDCA4Q9BXL8 241 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 OR51E2Q9H255 320 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 EGLN3Q9H6Z9 239 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 ATP13A2Q9NQ11 1180 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 MEPEQ9NQ76 525 aaPredicted RBP12.03□□□□□ -0.48
VRK3-205ENST00000593919 PIEZO1Q92508 2521 aa12.02□□□□□ -0.48
VRK3-205ENST00000593919 A0A087WUJ7 227 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 CDC42EP2O14613 210 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 TP53I11O14683 189 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 KLF4O43474 513 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 PRKYO43930 277 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 SLC34A2O95436 690 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 PIPP12273 146 aaPredicted RBP12.02□□□□□ -0.49
VRK3-205ENST00000593919 PGCP20142 388 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 CASP3P42574 277 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 SLC1A3P43003 542 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 C17orf67Q0P5P2 114 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 TSPAN31Q12999 210 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 SRSF6Q13247 344 aaKnown RBP12.02□□□□□ -0.49
VRK3-205ENST00000593919 TSTQ16762 297 aaKnown RBP12.02□□□□□ -0.49
VRK3-205ENST00000593919 COL28A1Q2UY09 1125 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 TMEM201Q5SNT2 666 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 ATP1A1-AS1Q5TC04 95 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 BTLAQ7Z6A9 289 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 KIF18BQ86Y91 864 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 OR8J1Q8NGP2 316 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 PSMF1Q92530 271 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 HS6ST2Q96MM7 605 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 TSSK6Q9BXA6 273 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 PLA2G12AQ9BZM1 189 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 DSN1Q9H410 356 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 RNF167Q9H6Y7 350 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 HMG20AQ9NP66 347 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 KRCC1Q9NPI7 259 aaPredicted RBP12.02□□□□□ -0.49
VRK3-205ENST00000593919 OSGIN1Q9UJX0 560 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 MED31Q9Y3C7 131 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 HRH3Q9Y5N1 445 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 WIF1Q9Y5W5 379 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 MED12Q93074 2177 aa12.02□□□□□ -0.49
VRK3-205ENST00000593919 TLX2O43763 284 aaPredicted RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 PFDN1O60925 122 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 IFI30P13284 250 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 GSTM3P21266 225 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 FPR3P25089 353 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 RBM34P42696 430 aaKnown RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 RANBP1P43487 201 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 PCYT1AP49585 367 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 RGS6P49758 472 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 ZNF91Q05481 1191 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 ITGADQ13349 1161 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 SOWAHCQ53LP3 525 aaPredicted RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 ACER2Q5QJU3 275 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 ZNF468Q5VIY5 522 aaPredicted RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 PRAMEF20Q5VT98 475 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 ACSM5Q6NUN0 579 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 ATG4DQ86TL0 474 aaPredicted RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 DPH1Q9BZG8 443 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 WDR12Q9GZL7 423 aaKnown RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 AKIP1Q9NQ31 210 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 HPF1Q9NWY4 346 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 DMXL2Q8TDJ6 3036 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 TRABD2BA6NFA1 517 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 DBTP11182 482 aaKnown RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 MAKP20794 623 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 PRKCDQ05655 676 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 DOC2BQ14184 412 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 DND1Q8IYX4 353 aaKnown RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 TEX47Q8TBZ9 253 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 GPR119Q8TDV5 335 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 BPIFA2Q96DR5 249 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 MGLLQ99685 303 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 CHCHD6Q9BRQ6 235 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 POLDIP3Q9BY77 421 aaKnown RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 SLIRPQ9GZT3 109 aaKnown RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 PALMDQ9NP74 551 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 ANKRD10Q9NXR5 420 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 GALNT8Q9NY28 637 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 PPP4R1LQ9P1A2 415 aa12.01□□□□□ -0.49
VRK3-205ENST00000593919 RPL36Q9Y3U8 105 aaKnown RBP12.01□□□□□ -0.49
VRK3-205ENST00000593919 ACACAQ13085 2346 aa12□□□□□ -0.49
VRK3-205ENST00000593919 APC2O95996 2303 aa12□□□□□ -0.49
VRK3-205ENST00000593919 ELOA3DA6NLF2 546 aaPredicted RBP12□□□□□ -0.49
VRK3-205ENST00000593919 CDC40O60508 579 aaKnown RBP eCLIP12□□□□□ -0.49
VRK3-205ENST00000593919 WISP1O95388 367 aa12□□□□□ -0.49
VRK3-205ENST00000593919 CCL3P10147 92 aa12□□□□□ -0.49
VRK3-205ENST00000593919 BMP4P12644 408 aa12□□□□□ -0.49
VRK3-205ENST00000593919 FUT1P19526 365 aa12□□□□□ -0.49
VRK3-205ENST00000593919 ITGA3P26006 1051 aa12□□□□□ -0.49
VRK3-205ENST00000593919 TACR3P29371 465 aa12□□□□□ -0.49
VRK3-205ENST00000593919 UGT2B10P36537 528 aa12□□□□□ -0.49
VRK3-205ENST00000593919 GIPRP48546 466 aa12□□□□□ -0.49
VRK3-205ENST00000593919 SMSP52788 366 aa12□□□□□ -0.49
VRK3-205ENST00000593919 CTBP2P56545 445 aa12□□□□□ -0.49
VRK3-205ENST00000593919 CDK5Q00535 292 aa12□□□□□ -0.49
VRK3-205ENST00000593919 CRYZQ08257 329 aaKnown RBP12□□□□□ -0.49
VRK3-205ENST00000593919 AIMP2Q13155 320 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms