RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 NPIPB7O75200 414 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 PRKD3O94806 890 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 OR5F1O95221 314 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 CLDN14O95500 239 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 THY1P04216 161 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 GPIP06744 558 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 CRHP06850 196 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 ATP6V1B2P21281 511 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 BMP5P22003 454 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 IFNA8P32881 189 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 SLC35A1P78382 337 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 FOXF2Q12947 444 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 PIN1Q13526 163 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-221ENST00000593026 RNPS1Q15287 305 aaKnown RBP13.35□□□□□ -0.27
DDX39A-221ENST00000593026 GTF2IRD2BQ6EKJ0 949 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 CYP2R1Q6VVX0 501 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 GTF2IRD2Q86UP8 949 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 SLC43A2Q8N370 569 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 FAM86B1Q8N7N1 296 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 ASB9Q96DX5 294 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 KTI12Q96EK9 354 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-221ENST00000593026 MPP4Q96JB8 637 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 PRRC1Q96M27 445 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 SFXN3Q9BWM7 321 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 TAPBPLQ9BX59 468 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 AMBRA1Q9C0C7 1298 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 ZNF629Q9UEG4 869 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-221ENST00000593026 RIMS3Q9UJD0 308 aa13.35□□□□□ -0.27
DDX39A-221ENST00000593026 A0A1W2PNV4 684 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 LIPT2A6NK58 231 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 FAM90A27PA6NNH2 459 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 EIF1BO60739 113 aaKnown RBP13.34□□□□□ -0.27
DDX39A-221ENST00000593026 LYPD3O95274 346 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 STAMBPO95630 424 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 THRBP10828 461 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 PTNP21246 168 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 FPR1P21462 350 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 OPRM1P35372 400 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 RPS5P46782 204 aaKnown RBP13.34□□□□□ -0.27
DDX39A-221ENST00000593026 YAP1P46937 504 aaKnown RBP13.34□□□□□ -0.27
DDX39A-221ENST00000593026 AGFG1P52594 562 aaKnown RBP13.34□□□□□ -0.27
DDX39A-221ENST00000593026 SIRPAP78324 504 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 MS4A2Q01362 244 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 EGR4Q05215 589 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 CDSNQ15517 529 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 OR7A5Q15622 319 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 MTX3Q5HYI7 312 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 EEF1A1P5Q5VTE0 462 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 LCN8Q6JVE9 175 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 CCDC121Q6ZUS5 278 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 GDF7Q7Z4P5 450 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 CYP4Z1Q86W10 505 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 DHFR2Q86XF0 187 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 LIX1LQ8IVB5 337 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 P3H2Q8IVL5 708 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 CNEP1R1Q8N9A8 125 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 LILRB4Q8NHJ6 448 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 ABHD3Q8WU67 409 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 MCUR1Q96AQ8 359 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 PYURFQ96I23 114 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 GMPPAQ96IJ6 420 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-221ENST00000593026 EPYCQ99645 322 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 NAA11Q9BSU3 229 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-221ENST00000593026 TMEM43Q9BTV4 400 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 PTDSS2Q9BVG9 487 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 GLRX2Q9NS18 164 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 CLEC4AQ9UMR7 237 aa13.34□□□□□ -0.27
DDX39A-221ENST00000593026 DOPEY1Q5JWR5 2465 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 MED12LQ86YW9 2145 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 PCNX1Q96RV3 2341 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 LRRK2Q5S007 2527 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 TRAV36DV7A0A075B6V5 113 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 EBAG9O00559 213 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 GSC2O15499 205 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 OR2T1O43869 369 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 CYTIPO60759 359 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 TNFSF13O75888 250 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 IL18BPO95998 194 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 KLK2P20151 261 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 GTF2E2P29084 291 aaKnown RBP13.33□□□□□ -0.28
DDX39A-221ENST00000593026 CTBP2P56545 445 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 ST3GAL3Q11203 375 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 SLC25A35Q3KQZ1 300 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 FAM69AQ5T7M9 428 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 ABLIM2Q6H8Q1 611 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 TTC33Q6PID6 262 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-221ENST00000593026 LINC00114Q6XXX2 140 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 WDR88Q6ZMY6 472 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 FAM214BQ7L5A3 538 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 MFSD8Q8NHS3 518 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 LRGUKQ96M69 825 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 FNDC11Q9BVV2 318 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 CADM1Q9BY67 442 aaKnown RBP13.33□□□□□ -0.28
DDX39A-221ENST00000593026 KLHL9Q9P2J3 617 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 A4GNTQ9UNA3 340 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 EMC9Q9Y3B6 208 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 ENPP4Q9Y6X5 453 aa13.33□□□□□ -0.28
DDX39A-221ENST00000593026 MPDZO75970 2070 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 A1L4Q6 167 aa13.32□□□□□ -0.28
DDX39A-221ENST00000593026 EEF1E1-BLOC1S5C9J1V9 151 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms