RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 NXPE2Q96DL1 559 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 ITPKCQ96DU7 683 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 C1GALT1C1Q96EU7 318 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 MRPL48Q96GC5 212 aaKnown RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 LCORQ96JN0 433 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 GPX7Q96SL4 187 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 TMEM43Q9BTV4 400 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 ALG8Q9BVK2 526 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 KCNN2Q9H2S1 579 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 ZNF768Q9H5H4 540 aaKnown RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 ABCB10Q9NRK6 738 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 SNTG1Q9NSN8 517 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 IL20RAQ9UHF4 553 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 SERTAD3Q9UJW9 196 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 RAXQ9Y2V3 346 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 SLC6A5Q9Y345 797 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 ZNF337Q9Y3M9 751 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 TMEM184BQ9Y519 407 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 PCDHGB6Q9Y5F9 930 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 NUP210LQ5VU65 1888 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 ARID1BQ8NFD5 2236 aaPredicted RBP9.12□□□□□ -0.95
VPS25-202ENST00000589219 ITPR1Q14643 2758 aa9.12□□□□□ -0.95
VPS25-202ENST00000589219 ZFYVE26Q68DK2 2539 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 APC2O95996 2303 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 LAMA5O15230 3695 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 C2orf92A0A1B0GVN3 265 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 TCRBV16S1A1N1A0A5B0 115 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 DAPL1A0PJW8 107 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 FAM183AA6NL82 134 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 TO15178 435 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 IDH3BO43837 385 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 ADAM11O75078 769 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 RGS9O75916 674 aaPredicted RBP9.11□□□□□ -0.95
VPS25-202ENST00000589219 UTS2O95399 124 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 MT-ND5P03915 603 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 IGKV3-11P04433 115 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 NGFRP08138 427 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 PNLIPP16233 465 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 FUT1P19526 365 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 NOS3P29474 1203 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 RPS7P62081 194 aaKnown RBP9.11□□□□□ -0.95
VPS25-202ENST00000589219 RPS4XP62701 263 aaKnown RBP9.11□□□□□ -0.95
VPS25-202ENST00000589219 PPP3R1P63098 170 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 HNRNPA0Q13151 305 aaKnown RBP9.11□□□□□ -0.95
VPS25-202ENST00000589219 SKP2Q13309 424 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 CRMP1Q14194 572 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 GGTLC2Q14390 218 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 COL28A1Q2UY09 1125 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 KLHL12Q53G59 568 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 SLC35D3Q5M8T2 416 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 DDI2Q5TDH0 399 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 STEAP3Q658P3 488 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 DPY19L2P2Q6ZN68 376 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 NUP54Q7Z3B4 507 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 LHFPL3Q86UP9 236 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 SLC22A16Q86VW1 577 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 ARIH2OSQ8N7S6 290 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 FAM181AQ8N9Y4 354 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 SNRNP27Q8WVK2 155 aaKnown RBP9.11□□□□□ -0.95
VPS25-202ENST00000589219 DAZLQ92904 295 aaKnown RBP9.11□□□□□ -0.95
VPS25-202ENST00000589219 OTULINQ96BN8 352 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 TMCO6Q96DC7 493 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 SENP5Q96HI0 755 aaPredicted RBP9.11□□□□□ -0.95
VPS25-202ENST00000589219 KCNS3Q9BQ31 491 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 DUSP23Q9BVJ7 150 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 YIPF2Q9BWQ6 316 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 BARHL1Q9BZE3 327 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 ZNF304Q9HCX3 659 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 PNO1Q9NRX1 252 aaKnown RBP9.11□□□□□ -0.95
VPS25-202ENST00000589219 COPS7AQ9UBW8 275 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 CHRNA9Q9UGM1 479 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 ZNF229Q9UJW7 825 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 NOX1Q9Y5S8 564 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 CLCA3PQ9Y6N3 262 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 MAU2Q9Y6X3 613 aa9.11□□□□□ -0.95
VPS25-202ENST00000589219 A0A087WV48 116 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 A0A1W2PQD3 144 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ELOA3DA6NLF2 546 aaPredicted RBP9.1□□□□□ -0.95
VPS25-202ENST00000589219 GABRPO00591 440 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ARPC3O15145 178 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 RGS5O15539 181 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ZNF264O43296 627 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 RNF13O43567 381 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 DDAH2O95865 285 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 LALBAP00709 142 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 APOA1P02647 267 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 SBK2P0C263 348 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ANKRD34CP0C6C1 535 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 APEHP13798 732 aaKnown RBP9.1□□□□□ -0.95
VPS25-202ENST00000589219 ACP1P24666 158 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 IL12BP29460 328 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 TNFSF8P32971 234 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 SDC2P34741 201 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 CD79BP40259 229 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 OR1D4P47884 311 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 CD97P48960 835 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 MTNR1BP49286 362 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 SEPHS1P49903 392 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 PRPS1P60891 318 aa9.1□□□□□ -0.95
VPS25-202ENST00000589219 ACTA2P62736 377 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms