RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 C4orf36Q96KX1 117 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 DPH1Q9BZG8 443 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 NRIP3Q9NQ35 241 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 EXOSC3Q9NQT5 275 aaKnown RBP12.31□□□□□ -0.44
KDM4B-208ENST00000589104 PLEKHM1Q9Y4G2 1056 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 XIRP2A4UGR9 3374 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 CTSVO60911 334 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 UPK3AO75631 287 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 CBX7O95931 251 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 CLUP10909 449 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 KIR2DL1P43626 348 aaPredicted RBP12.31□□□□□ -0.44
KDM4B-208ENST00000589104 OR12D2P58182 307 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 MANEAQ5SRI9 462 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 BCL2L15Q5TBC7 163 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 FDX2Q6P4F2 183 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 OVCH2Q7RTZ1 564 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 MACROD1Q9BQ69 325 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 DPAGT1Q9H3H5 408 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 ZNF624Q9P2J8 865 aaPredicted RBP12.31□□□□□ -0.44
KDM4B-208ENST00000589104 PRRC2BQ5JSZ5 2229 aaKnown RBP12.31□□□□□ -0.44
KDM4B-208ENST00000589104 TRABD2BA6NFA1 517 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 PRAF2O60831 178 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 SLC35G4P0C7Q5 338 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 ANXA3P12429 323 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 CCL5P13501 91 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 CENPAP49450 140 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 RAB14P61106 215 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 B3GNTL1Q67FW5 361 aaPredicted RBP12.31□□□□□ -0.44
KDM4B-208ENST00000589104 GLDNQ6ZMI3 551 aaPredicted RBP12.31□□□□□ -0.44
KDM4B-208ENST00000589104 C17orf107Q6ZR85 190 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 ZAR1Q86SH2 424 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 ZNF595Q8IYB9 648 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 ZNF431Q8TF32 576 aaPredicted RBP12.31□□□□□ -0.44
KDM4B-208ENST00000589104 BPIFA2Q96DR5 249 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 SGTBQ96EQ0 304 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 CAPNS2Q96L46 248 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 GABRG3Q99928 467 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 NDC1Q9BTX1 674 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 ZNF436Q9C0F3 470 aaPredicted RBP12.31□□□□□ -0.44
KDM4B-208ENST00000589104 C20orf85Q9H1P6 137 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 ZNF222Q9UK12 451 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 FOXJ3Q9UPW0 622 aa12.31□□□□□ -0.44
KDM4B-208ENST00000589104 IGKV1D-42A0A075B6H8 117 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 SNAPC5O75971 98 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 ADH7P40394 386 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 CCR9P51686 369 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 RPS7P62081 194 aaKnown RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 ILF3Q12906 894 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■□□□□ 10.7
KDM4B-208ENST00000589104 EXOSC2Q13868 293 aaKnown RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 AMZ1Q400G9 498 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 ACSM3Q53FZ2 586 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 ZNF626Q68DY1 528 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 ASPHD2Q6ICH7 369 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 RGS7BPQ6MZT1 257 aaPredicted RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 RPL22L1Q6P5R6 122 aaKnown RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 LSRQ86X29 649 aaPredicted RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 CEP76Q8TAP6 659 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 CNOT9Q92600 299 aaKnown RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 GHSRQ92847 366 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 ZNF559Q9BR84 538 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 MGAT4AQ9UM21 535 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 COPS3Q9UNS2 423 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 YBX2Q9Y2T7 364 aaKnown RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 C5orf42Q9H799 3197 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 AIPO00170 330 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 CTNSO60931 367 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 RAB3BP20337 219 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 CLDN2P57739 230 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 COL19A1Q14993 1142 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 HDDC2Q7Z4H3 204 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 GRASPQ7Z6J2 395 aaPredicted RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 KCT2Q8NC54 265 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 OR13C2Q8NGS9 318 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 OTULINQ96BN8 352 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 BBS4Q96RK4 519 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 SHARPINQ9H0F6 387 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 HRASLSQ9HDD0 168 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 MYOZ1Q9NP98 299 aaPredicted RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 NUDT15Q9NV35 164 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 SLC6A5Q9Y345 797 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 GABARAPH6UMI1 98 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 PEX12O00623 359 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 PEX14O75381 377 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 RCBTB2O95199 551 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 LDOC1O95751 146 aaPredicted RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 CH25HO95992 272 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 PCCBP05166 539 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 CT62P0C5K7 136 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 ZNF888P0CJ79 500 aaPredicted RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 C5AR1P21730 350 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 XPAP23025 273 aaPredicted RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 GDI2P50395 445 aaKnown RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 PSG6Q00889 435 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 HSF2Q03933 536 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 IDNKQ5T6J7 187 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 Q6ZTK2 550 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 THEM6Q8WUY1 208 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 ZNF775Q96BV0 537 aaPredicted RBP12.3□□□□□ -0.44
KDM4B-208ENST00000589104 LINC00052Q96N35 136 aa12.3□□□□□ -0.44
KDM4B-208ENST00000589104 DERL3Q96Q80 235 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms