RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-206	ENST00000588300	MREG	Q8N565	214 aa		13.98	□□□□□ -0.17
ERCC1-206	ENST00000588300	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.98	□□□□□ -0.17
ERCC1-206	ENST00000588300	OR10H5	Q8NGA6	315 aa		13.98	□□□□□ -0.17
ERCC1-206	ENST00000588300	INPP5K	Q9BT40	448 aa		13.98	□□□□□ -0.17
ERCC1-206	ENST00000588300	REPIN1	Q9BWE0	567 aa	Known RBP	13.98	□□□□□ -0.17
ERCC1-206	ENST00000588300	C1QTNF6	Q9BXI9	259 aa		13.98	□□□□□ -0.17
ERCC1-206	ENST00000588300	FKRP	Q9H9S5	495 aa		13.98	□□□□□ -0.17
ERCC1-206	ENST00000588300	MXRA5	Q9NR99	2828 aa		13.98	□□□□□ -0.17
ERCC1-206	ENST00000588300	HEATR1	Q9H583	2144 aa	Known RBP	13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	FAM234B	A2RU67	622 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	CFAP73	A6NFT4	308 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300		H7C417	338 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	GPRIN2	O60269	458 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	C1QC	P02747	245 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	DBI	P07108	87 aa	Known RBP	13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	ALDOC	P09972	364 aa	Known RBP	13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	BMP4	P12644	408 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	RPS4Y1	P22090	263 aa	Known RBP	13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	NME5	P56597	212 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	UFM1	P61960	85 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	STX3	Q13277	289 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	SLC17A1	Q14916	467 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	CHRFAM7A	Q494W8	412 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	MRPL2	Q5T653	305 aa	Known RBP	13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	C1QTNF12	Q5T7M4	302 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	TSPO2	Q5TGU0	170 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	PAQR6	Q6TCH4	344 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	WDR31	Q8NA23	367 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	TEX37	Q96LM6	180 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	SLC17A5	Q9NRA2	495 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	SLC7A10	Q9NS82	523 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	AIG1	Q9NVV5	245 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300	ATP23	Q9Y6H3	246 aa		13.97	□□□□□ -0.17
ERCC1-206	ENST00000588300		A0A096LNT2	108 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	ZC3H12D	A2A288	527 aa	Known RBP	13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	PGR	P06401	933 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	NR2F1	P10589	423 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	SLC25A16	P16260	332 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	CHRNB3	Q05901	458 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	LOXL1	Q08397	574 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	EPS8	Q12929	822 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	TMEM249	Q2WGJ8	235 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	ELOA3B	Q3SY89	546 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	C6orf52	Q5T4I8	152 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	KLHL24	Q6TFL4	600 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	ZNF621	Q6ZSS3	439 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	ZNF440	Q8IYI8	595 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	ZNF525	Q8N782	197 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	ELOA3	Q8NG57	546 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	HTRA1	Q92743	480 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	TMEM45B	Q96B21	275 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	OR52E6	Q96RD3	313 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	TNFRSF13C	Q96RJ3	184 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	PNPO	Q9NVS9	261 aa		13.96	□□□□□ -0.17
ERCC1-206	ENST00000588300	ALPK2	Q86TB3	2170 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	RNF212B	A8MTL3	300 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	WNT11	O96014	354 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	GSN	P06396	782 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	GPI	P06744	558 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	CXCR1	P25024	350 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	MPG	P29372	298 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	CDKN2C	P42773	168 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	SLC25A3	Q00325	362 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	BST1	Q10588	318 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	GSTA3	Q16772	222 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	SPATA19	Q7Z5L4	167 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	PEX5L	Q8IYB4	626 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	PNPT1	Q8TCS8	783 aa	Known RBP	13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	FAM168A	Q92567	244 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	ZBTB18	Q99592	522 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	SF3B5	Q9BWJ5	86 aa	Known RBP	13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	ADAM19	Q9H013	955 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	CENPH	Q9H3R5	247 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	KCNK9	Q9NPC2	374 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	PMF1-BGLAP	U3KQ54	211 aa		13.95	□□□□□ -0.18
ERCC1-206	ENST00000588300	LIPT2	A6NK58	231 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	SDHD	O14521	159 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	AKR7A3	O95154	331 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	KRT75	O95678	551 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	CSF3	P09919	207 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	IL12A	P29459	219 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	APOBEC3A	P31941	199 aa	Predicted RBP	13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	PRPS1	P60891	318 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	VLDLR	P98155	873 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	CEACAM7	Q14002	265 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	OR7A5	Q15622	319 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	COX20	Q5RI15	118 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	AAED1	Q7RTV5	226 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	LSR	Q86X29	649 aa	Predicted RBP	13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	TMEM99	Q8N816	258 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	POMGNT2	Q8NAT1	580 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	OR9K2	Q8NGE7	335 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	PAIP2	Q9BPZ3	127 aa	Known RBP	13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	PIF1	Q9H611	641 aa		13.94	□□□□□ -0.18
ERCC1-206	ENST00000588300	MANSC1	Q9H8J5	431 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms