RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FHL1Q13642 323 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 PTGES3Q15185 160 aaKnown RBP10.2□□□□□ -0.78
VMP1-207ENST00000588131 GXYLT1Q4G148 440 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 C1orf140Q5VVS0 124 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 TTC23Q5W5X9 447 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 IGFL3Q6UXB1 125 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 CCDC71Q8IV32 467 aaPredicted RBP10.2□□□□□ -0.78
VMP1-207ENST00000588131 TMEM251Q8N6I4 163 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 IQCF1Q8N6M8 205 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 C10orf53Q8N6V4 93 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 ZFP62Q8NB50 900 aaPredicted RBP10.2□□□□□ -0.78
VMP1-207ENST00000588131 TMEM178AQ8NBL3 297 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 OR51A7Q8NH64 312 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 OR14L1PQ8NHC6 308 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 EXTL1Q92935 676 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 ARL5BQ96KC2 179 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 ZNF570Q96NI8 536 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 TNFRSF13CQ96RJ3 184 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 PITX2Q99697 317 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 ANKRD60Q9BZ19 345 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 ENKD1Q9H0I2 346 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 CELSR3Q9NYQ7 3312 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 IL20RAQ9UHF4 553 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 NDRG4Q9ULP0 352 aaKnown RBP10.2□□□□□ -0.78
VMP1-207ENST00000588131 SIGLEC7Q9Y286 467 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 CDH10Q9Y6N8 788 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 TRAV17A0A0B4J275 112 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 ZAR1LA6NP61 321 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 FTCDNL1E5RQL4 147 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 MKRN2OSH3BPM6 223 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 AHSA1O95433 338 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 HPNP05981 417 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 ASAH2BP0C7U1 165 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 TFPIP10646 304 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 IMPDH2P12268 514 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 MYF6P23409 242 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 ELK4P28324 431 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 GGT2P36268 569 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 KEAP1Q14145 624 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 HYAL4Q2M3T9 481 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 GLYR1Q49A26 553 aaPredicted RBP10.19□□□□□ -0.78
VMP1-207ENST00000588131 SYT14P1Q58G82 188 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 CMPK2Q5EBM0 449 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 RNFT1Q5M7Z0 435 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 ZNF691Q5VV52 312 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 C3orf33Q6P1S2 294 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 THSD4Q6ZMP0 1018 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 OAFQ86UD1 273 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 ZADH2Q8N4Q0 377 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 MARVELD2Q8N4S9 558 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 CLDN22Q8N7P3 220 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 OR4Q3Q8NH05 313 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 FANK1Q8TC84 345 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 SNRNP27Q8WVK2 155 aaKnown RBP10.19□□□□□ -0.78
VMP1-207ENST00000588131 LIPHQ8WWY8 451 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 TM9SF4Q92544 642 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 DDIT4LQ96D03 193 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 CRELD1Q96HD1 420 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 SAMD8Q96LT4 415 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 MUS81Q96NY9 551 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 OR52D1Q9H346 318 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 Q9H521 79 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 MCCC2Q9HCC0 563 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 SERINC1Q9NRX5 453 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 TBC1D23Q9NUY8 699 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 IL20Q9NYY1 176 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 UBAP1Q9NZ09 502 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 B4GALT7Q9UBV7 327 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 SEC14L4Q9UDX3 406 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 ENOPH1Q9UHY7 261 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 LRCH1Q9Y2L9 728 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 MRPS18CQ9Y3D5 142 aaKnown RBP10.19□□□□□ -0.78
VMP1-207ENST00000588131 ZNF337Q9Y3M9 751 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 GMPPBQ9Y5P6 360 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 APC2O95996 2303 aa10.19□□□□□ -0.78
VMP1-207ENST00000588131 A0A1W2PNR3 127 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 HTR3EA5X5Y0 456 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 M0R129 80 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 HCN1O60741 890 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 HOXB1P14653 301 aaPredicted RBP10.18□□□□□ -0.78
VMP1-207ENST00000588131 SFTPDP35247 375 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 IDUAP35475 653 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SLC9A3P48764 834 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 MAP2K6P52564 334 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 RPS4XP62701 263 aaKnown RBP10.18□□□□□ -0.78
VMP1-207ENST00000588131 PPIAP62937 165 aaKnown RBP10.18□□□□□ -0.78
VMP1-207ENST00000588131 MYBPHQ13203 477 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 MED21Q13503 144 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 GINS1Q14691 196 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 ZNF169Q14929 603 aaPredicted RBP10.18□□□□□ -0.78
VMP1-207ENST00000588131 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.18□□□□□ -0.782e-7■■■■■ 32.6
VMP1-207ENST00000588131 ZBED5Q49AG3 693 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 CLEC12AQ5QGZ9 265 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 FAM69AQ5T7M9 428 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SLX4IPQ5VYV7 408 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SLC6A19Q695T7 634 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 C12orf73Q69YU5 71 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 ACSM5Q6NUN0 579 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 SMARCD3Q6STE5 483 aa10.18□□□□□ -0.78
VMP1-207ENST00000588131 C5orf46Q6UWT4 87 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms