RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 NAA11Q9BSU3 229 aaPredicted RBP12.61□□□□□ -0.39
VMP1-206ENST00000587945 ADAM19Q9H013 955 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 SLC7A10Q9NS82 523 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 TAS2R16Q9NYV7 291 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 P2RX2Q9UBL9 471 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 MALT1Q9UDY8 824 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 FLVCR1Q9Y5Y0 555 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 CADP27708 2225 aa12.61□□□□□ -0.39
VMP1-206ENST00000587945 SLCO1B7G3V0H7 640 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 M0R1B8 84 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 PDLIM1O00151 329 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 FAAHO00519 579 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 EIF1BO60739 113 aaKnown RBP12.6□□□□□ -0.39
VMP1-206ENST00000587945 AKR7A3O95154 331 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 ANP32DO95626 131 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 IL6P05231 212 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 BCHEP06276 602 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 PRG2P13727 222 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 CD40P25942 277 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 ACAA2P42765 397 aaKnown RBP12.6□□□□□ -0.39
VMP1-206ENST00000587945 BNIP2Q12982 314 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 CEACAM7Q14002 265 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 OR7A5Q15622 319 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 ETFDHQ16134 617 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 OTUD3Q5T2D3 398 aaPredicted RBP12.6□□□□□ -0.39
VMP1-206ENST00000587945 TSPO2Q5TGU0 170 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 ATG16L1Q676U5 607 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 SLC22A25Q6T423 547 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 TMEM108Q6UXF1 575 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 B3GLCTQ6Y288 498 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 CLIP4Q8N3C7 705 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 CADM2Q8N3J6 435 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 TMEM99Q8N816 258 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 WDR31Q8NA23 367 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 SLC38A5Q8WUX1 472 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 VPS33AQ96AX1 596 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 MAELQ96JY0 434 aaKnown RBP12.6□□□□□ -0.39
VMP1-206ENST00000587945 HS6ST2Q96MM7 605 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 MANSC1Q9H8J5 431 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 TPT1P8Q9HAU6 139 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 NKIRAS1Q9NYS0 192 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 UPB1Q9UBR1 384 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 POU2F3Q9UKI9 436 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 ZNF443Q9Y2A4 671 aaPredicted RBP12.6□□□□□ -0.39
VMP1-206ENST00000587945 B3GALT5Q9Y2C3 310 aa12.6□□□□□ -0.39
VMP1-206ENST00000587945 CDHR4A6H8M9 788 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 LIPT2A6NK58 231 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 TFPTP0C1Z6 253 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 UQCRBP14927 111 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 CXCR1P25024 350 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 DSTNP60981 165 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 IRX1P78414 480 aaPredicted RBP12.59□□□□□ -0.39
VMP1-206ENST00000587945 SLC25A3Q00325 362 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 LIN52Q52LA3 116 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 C6orf10Q5SRN2 563 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 AGAP6Q5VW22 663 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 PAQR6Q6TCH4 344 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 KLHL17Q6TDP4 642 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 SSX8Q7RTT4 187 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 ZNF440Q8IYI8 595 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 ZIC4Q8N9L1 334 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 OR9K2Q8NGE7 335 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 HTRA1Q92743 480 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 TMEM19Q96HH6 336 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 ITCHQ96J02 903 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 RADILQ96JH8 1075 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 ZNF385AQ96PM9 386 aaKnown RBP12.59□□□□□ -0.39
VMP1-206ENST00000587945 CACNG6Q9BXT2 260 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 SDR39U1Q9NRG7 319 aaPredicted RBP12.59□□□□□ -0.39
VMP1-206ENST00000587945 FAIMQ9NVQ4 179 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 ZIM2Q9NZV7 527 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 ADAM21Q9UKJ8 722 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 SLC9A8Q9Y2E8 581 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 DSPPQ9NZW4 1301 aa12.59□□□□□ -0.39
VMP1-206ENST00000587945 UBDO15205 165 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 SSX4O60224 188 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 GPIP06744 558 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 NUDT7P0C024 238 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 ZCCHC18P0CG32 403 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 PTAFRP25105 342 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 TTKP33981 857 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 POLR2JP52435 117 aaKnown RBP12.58□□□□□ -0.4
VMP1-206ENST00000587945 CRISP3P54108 245 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 GSTA3Q16772 222 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 WBP2NLQ6ICG8 309 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 OR7E24Q6IFN5 339 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 C11orf71Q6IPW1 123 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 DNM1P46Q6ZS02 220 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 TLCD1Q96CP7 247 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 MDFIQ99750 246 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 DHRS9Q9BPW9 319 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 GRIP2Q9C0E4 1043 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 RMND5AQ9H871 391 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 TMBIM4Q9HC24 238 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 SLC17A5Q9NRA2 495 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 PARPBPQ9NWS1 579 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 ADPRHL2Q9NX46 363 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 CALML5Q9NZT1 146 aa12.58□□□□□ -0.4
VMP1-206ENST00000587945 DCTN4Q9UJW0 460 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms