RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 SLC25A15Q9Y619 301 aa16.52■□□□□ 0.24
TRIM47-205ENST00000587774 FBN1P35555 2871 aaKnown RBP16.52■□□□□ 0.24
TRIM47-205ENST00000587774 COL6A5A8TX70 2615 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 CDHR4A6H8M9 788 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 EIF1BO60739 113 aaKnown RBP16.51■□□□□ 0.23
TRIM47-205ENST00000587774 SLC22A3O75751 556 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 KRT75O95678 551 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 IL6P05231 212 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 BCHEP06276 602 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 PTNP21246 168 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 IDUAP35475 653 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 GABRA6Q16445 453 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 PAQR6Q6TCH4 344 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 TMEM108Q6UXF1 575 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 VRK2Q86Y07 508 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 PEX5LQ8IYB4 626 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 PMM1Q92871 262 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 FAIMQ9NVQ4 179 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 MALRD1Q5VYJ5 2156 aa16.51■□□□□ 0.23
TRIM47-205ENST00000587774 SLCO1B7G3V0H7 640 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 PDLIM1O00151 329 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 GKN3PP0CG01 181 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 DSTNP60981 165 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 SLC17A1Q14916 467 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 GTDC1Q4AE62 458 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 RPS26P11Q5JNZ5 115 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-205ENST00000587774 C9orf135Q5VTT2 229 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 ATG16L1Q676U5 607 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 DNM1P46Q6ZS02 220 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 ZNF440Q8IYI8 595 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 OR9I1Q8NGQ6 314 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 OR52P1PQ8NH57 321 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 AURKBQ96GD4 344 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-205ENST00000587774 RADILQ96JH8 1075 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 HS6ST2Q96MM7 605 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 MUS81Q96NY9 551 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 OR52B2Q96RD2 323 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 NAA11Q9BSU3 229 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-205ENST00000587774 AMBRA1Q9C0C7 1298 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 GRIP2Q9C0E4 1043 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 ADAM19Q9H013 955 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 SLC7A10Q9NS82 523 aa16.5■□□□□ 0.23
TRIM47-205ENST00000587774 ZNF443Q9Y2A4 671 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-205ENST00000587774 KIAA1324LA8MWY0 1029 aaPredicted RBP16.49■□□□□ 0.23
TRIM47-205ENST00000587774 E7EQL1 145 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 ANP32DO95626 131 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 PTAFRP25105 342 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 CD40P25942 277 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 CRATP43155 626 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 MAP2K6P52564 334 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 CRISP3P54108 245 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 SLC18A1P54219 525 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 MAGOHP61326 146 aaKnown RBP16.49■□□□□ 0.23
TRIM47-205ENST00000587774 SLC25A3Q00325 362 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 LIN52Q52LA3 116 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 OTUD3Q5T2D3 398 aaPredicted RBP16.49■□□□□ 0.23
TRIM47-205ENST00000587774 TSPO2Q5TGU0 170 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 OR7E24Q6IFN5 339 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 SLC22A25Q6T423 547 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 KLHL17Q6TDP4 642 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 B3GLCTQ6Y288 498 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 SLC38A5Q8WUX1 472 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 VPS33AQ96AX1 596 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 REG4Q9BYZ8 158 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 MANSC1Q9H8J5 431 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 TPT1P8Q9HAU6 139 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 SDR39U1Q9NRG7 319 aaPredicted RBP16.49■□□□□ 0.23
TRIM47-205ENST00000587774 CALML5Q9NZT1 146 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 ZIM2Q9NZV7 527 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 UPB1Q9UBR1 384 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 POU2F3Q9UKI9 436 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 MGAT4BQ9UQ53 548 aa16.49■□□□□ 0.23
TRIM47-205ENST00000587774 LIPT2A6NK58 231 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 M0R1B8 84 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 AKR7A3O95154 331 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 TFPTP0C1Z6 253 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 ZCCHC18P0CG32 403 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 CXCR1P25024 350 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 ACAA2P42765 397 aaKnown RBP16.48■□□□□ 0.23
TRIM47-205ENST00000587774 DMTNQ08495 405 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 BNIP2Q12982 314 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 CEACAM7Q14002 265 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 OR7A5Q15622 319 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 GSTA3Q16772 222 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 RNF220Q5VTB9 566 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 AGAP6Q5VW22 663 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 C11orf71Q6IPW1 123 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 CADM2Q8N3J6 435 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 TMEM99Q8N816 258 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 C1orf162Q8NEQ5 155 aaPredicted RBP16.48■□□□□ 0.23
TRIM47-205ENST00000587774 TMEM19Q96HH6 336 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 ITCHQ96J02 903 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 CACNG6Q9BXT2 260 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 PARPBPQ9NWS1 579 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 NKIRAS1Q9NYS0 192 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 DCTN4Q9UJW0 460 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 ADAM21Q9UKJ8 722 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 B3GALT5Q9Y2C3 310 aa16.48■□□□□ 0.23
TRIM47-205ENST00000587774 GPIP06744 558 aa16.47■□□□□ 0.23
TRIM47-205ENST00000587774 PRG2P13727 222 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms