RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, human

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-206	ENST00000587509	OR7A5	Q15622	319 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	C1orf140	Q5VVS0	124 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	REP15	Q6BDI9	236 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ULK3	Q6PHR2	472 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	C6orf89	Q6UWU4	347 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	CASP12	Q6UXS9	341 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	STAC2	Q6ZMT1	411 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	NET1	Q7Z628	596 aa	Predicted RBP	10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	SNX32	Q86XE0	403 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	UBE2J2	Q8N2K1	259 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	CLIP4	Q8N3C7	705 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	OR52E4	Q8NGH9	312 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	SLC38A4	Q969I6	547 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	C3orf49	Q96BT1	292 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	SLC47A1	Q96FL8	570 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ZC3HAV1L	Q96H79	300 aa	Known RBP	10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	WFIKKN1	Q96NZ8	548 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	SF3B5	Q9BWJ5	86 aa	Known RBP	10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	KAT8	Q9H7Z6	458 aa	Known RBP	10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	SAR1A	Q9NR31	198 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ST6GALNAC2	Q9UJ37	374 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ITGB1BP2	Q9UKP3	347 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	FBN2	P35556	2912 aa		10.42	□□□□□ -0.74
PRKCSH-206	ENST00000587509	OR6C65	A6NJZ3	312 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	LIPT2	A6NK58	231 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	FRS3	O43559	492 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	AKAP8	O43823	692 aa	Known RBP	10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	FMO6P	O60774	539 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	C8B	P07358	591 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	FPR1	P21462	350 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	DNAJA1	P31689	397 aa	Known RBP	10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	PCBP3	P57721	371 aa	Known RBP	10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	TGFBR3	Q03167	851 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ALG10B	Q5I7T1	473 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	SFRP5	Q5T4F7	317 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	C1QTNF12	Q5T7M4	302 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	BHLHA15	Q7RTS1	189 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	NUFIP2	Q7Z417	695 aa	Known RBP	10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ATG4D	Q86TL0	474 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	RETREG3	Q86VR2	466 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	P2RY8	Q86VZ1	359 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	CXorf67	Q86X51	503 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	GABRG1	Q8N1C3	465 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	LSMEM1	Q8N8F7	131 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	OR10A6	Q8NH74	314 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	RP9	Q8TA86	221 aa	Known RBP	10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	RNF217	Q8TC41	542 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	HSD17B8	Q92506	261 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ZNF524	Q96C55	264 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	LRRC58	Q96CX6	371 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	MUCL1	Q96DR8	90 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	PIK3IP1	Q96FE7	263 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ZNF300	Q96RE9	604 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	IKZF5	Q9H5V7	419 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ASB6	Q9NWX5	421 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ADPRHL2	Q9NX46	363 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	BAG5	Q9UL15	447 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	RASD1	Q9Y272	281 aa		10.41	□□□□□ -0.74
PRKCSH-206	ENST00000587509	DCHS2	Q6V1P9	2916 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	AQP7P3	A6NL99	342 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	TMEM229A	B2RXF0	380 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	KRT33A	O76009	404 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ADA	P00813	363 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	PRG2	P13727	222 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	H3F3A	P84243	136 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	CEACAM7	Q14002	265 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	POU4F3	Q15319	338 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ADRM1	Q16186	407 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	VMAC	Q2NL98	169 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	FAM69A	Q5T7M9	428 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	FBXW9	Q5XUX1	488 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	TMEM225	Q6GV28	225 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ZNF613	Q6PF04	617 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	C20orf204	Q6ZNR8	217 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	SPATA21	Q7Z572	469 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	GPAT4	Q86UL3	456 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	WFDC8	Q8IUA0	241 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	MFSD8	Q8NHS3	518 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	C10orf82	Q8WW14	230 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	PROX1	Q92786	737 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	TMEM45B	Q96B21	275 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	S100PBP	Q96BU1	408 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ESRP2	Q9H6T0	727 aa	Known RBP	10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	TAS2R16	Q9NYV7	291 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	UPB1	Q9UBR1	384 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	MALT1	Q9UDY8	824 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	CORIN	Q9Y5Q5	1042 aa		10.4	□□□□□ -0.74
PRKCSH-206	ENST00000587509	ABCA4	P78363	2273 aa		10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509	TRAV36DV7	A0A075B6V5	113 aa		10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509		A0A1B0GWA3	101 aa		10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509	CIB4	A0PJX0	185 aa		10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509	ZC3H12D	A2A288	527 aa	Known RBP	10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509	CCT8L1P	A6NM43	557 aa		10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509	ZNF716	A6NP11	495 aa		10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509	AIM2	O14862	343 aa		10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509	GCM2	O75603	506 aa	Predicted RBP	10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509	MFN2	O95140	757 aa		10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509	IMPDH2	P12268	514 aa		10.39	□□□□□ -0.75
PRKCSH-206	ENST00000587509	GGT1	P19440	569 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms