RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 BIRC5O15392 142 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 SNUPNO95149 360 aaKnown RBP16.96■□□□□ 0.31
TRAF4-216ENST00000586813 CHRM4P08173 479 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 SLC25A16P16260 332 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 LBPP18428 481 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 RPS4Y1P22090 263 aaKnown RBP16.96■□□□□ 0.31
TRAF4-216ENST00000586813 S100A3P33764 101 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 VLDLRP98155 873 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 TSPO2Q5TGU0 170 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 PAQR6Q6TCH4 344 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 WDR60Q8WVS4 1066 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 FAM168AQ92567 244 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 PMM1Q92871 262 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 TMEM109Q9BVC6 243 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 MANSC1Q9H8J5 431 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 FKRPQ9H9S5 495 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 BTNL2Q9UIR0 455 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 HAO1Q9UJM8 370 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 ATP23Q9Y6H3 246 aa16.96■□□□□ 0.31
TRAF4-216ENST00000586813 FAM157CP0CG43 387 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 SLC1A3P43003 542 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 SLC1A6P48664 564 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 MAP2K6P52564 334 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 TGFBR3Q03167 851 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 LRRC74BQ6ZQY2 392 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 KIRREL3Q8IZU9 778 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 TRIML2Q8N7C3 387 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 TMEM45BQ96B21 275 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 TRIM44Q96DX7 344 aaPredicted RBP16.95■□□□□ 0.3
TRAF4-216ENST00000586813 TEX37Q96LM6 180 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 PANX1Q96RD7 426 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 MEAF6Q9HAF1 191 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 CDC42EP3Q9UKI2 254 aa16.95■□□□□ 0.3
TRAF4-216ENST00000586813 CFAP73A6NFT4 308 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 CCDC154A6NI56 674 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 TM9SF1O15321 606 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 CSF3P09919 207 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 BMP4P12644 408 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 UQCRBP14927 111 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 MPGP29372 298 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 ANXA11P50995 505 aaKnown RBP16.94■□□□□ 0.3
TRAF4-216ENST00000586813 EFNA4P52798 201 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 NME5P56597 212 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 TXNL4AP83876 142 aaKnown RBP16.94■□□□□ 0.3
TRAF4-216ENST00000586813 GNA13Q14344 377 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 OTUD3Q5T2D3 398 aaPredicted RBP16.94■□□□□ 0.3
TRAF4-216ENST00000586813 MRPL2Q5T653 305 aaKnown RBP16.94■□□□□ 0.3
TRAF4-216ENST00000586813 C1QTNF12Q5T7M4 302 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 OGFOD2Q6N063 350 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 C10orf105Q8TEF2 133 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 TMEM158Q8WZ71 300 aa16.94■□□□□ 0.3
TRAF4-216ENST00000586813 SSU72Q9NP77 194 aaKnown RBP16.94■□□□□ 0.3
TRAF4-216ENST00000586813 ATP6V1G2-DDX39BF2Z307 99 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 DBIP07108 87 aaKnown RBP16.93■□□□□ 0.3
TRAF4-216ENST00000586813 ALDOCP09972 364 aaKnown RBP16.93■□□□□ 0.3
TRAF4-216ENST00000586813 IL7RP16871 459 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 APOBEC3AP31941 199 aaPredicted RBP16.93■□□□□ 0.3
TRAF4-216ENST00000586813 CDKN2CP42773 168 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 PRPS1P60891 318 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 UFM1P61960 85 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 CHRNB3Q05901 458 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 EPS8Q12929 822 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 KRT71Q3SY84 523 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 OR9K2Q8NGE7 335 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 PNPT1Q8TCS8 783 aaKnown RBP16.93■□□□□ 0.3
TRAF4-216ENST00000586813 NANOS1Q8WY41 292 aaKnown RBP16.93■□□□□ 0.3
TRAF4-216ENST00000586813 ADAM19Q9H013 955 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 MTHFD2LQ9H903 347 aaPredicted RBP16.93■□□□□ 0.3
TRAF4-216ENST00000586813 AIG1Q9NVV5 245 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 TMEM160Q9NX00 188 aa16.93■□□□□ 0.3
TRAF4-216ENST00000586813 SVEP1Q4LDE5 3571 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 RGS16O15492 202 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-216ENST00000586813 PHF1O43189 567 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-216ENST00000586813 AKR7A3O95154 331 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 PGRP06401 933 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 NR2F1P10589 423 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 BGNP21810 368 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 CEACAM7Q14002 265 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 COX20Q5RI15 118 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 KLHL24Q6TFL4 600 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 TMEM99Q8N816 258 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 ZIC4Q8N9L1 334 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 PROX1Q92786 737 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 ZNF385AQ96PM9 386 aaKnown RBP16.92■□□□□ 0.3
TRAF4-216ENST00000586813 OR52E6Q96RD3 313 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 KCNK17Q96T54 332 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 SF3B5Q9BWJ5 86 aaKnown RBP16.92■□□□□ 0.3
TRAF4-216ENST00000586813 PNPOQ9NVS9 261 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 RLIMQ9NVW2 624 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 PMF1-BGLAPU3KQ54 211 aa16.92■□□□□ 0.3
TRAF4-216ENST00000586813 MALRD1Q5VYJ5 2156 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 LIPT2A6NK58 231 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 AQP7P3A6NL99 342 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 LY6HO94772 140 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 WNT11O96014 354 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 GSNP06396 782 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 GPIP06744 558 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 IGHV4-31P0DP07 118 aa16.91■□□□□ 0.3
TRAF4-216ENST00000586813 ZNF16P17020 682 aaPredicted RBP16.91■□□□□ 0.3
TRAF4-216ENST00000586813 CDH2P19022 906 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms