RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 GAGE12IP0CL82 117 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ANPEPP15144 967 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 B4GALT1P15291 398 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ACADSP16219 412 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TAC1P20366 129 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 AADACP22760 399 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SPRP35270 261 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PTGER4P35408 488 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ATP5OP48047 213 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 CEBPDP49716 269 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TPMTP51580 245 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 IL9RQ01113 521 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SPIBQ01892 262 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF415Q09FC8 603 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RASGEF1BQ0VAM2 473 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GAGE1Q13065 139 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GAGE4Q13068 117 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PDZK1IP1Q13113 114 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ECSCRQ19T08 205 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 C14orf28Q4W4Y0 310 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RFTN2Q52LD8 501 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF311Q5JNZ3 666 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SLX4IPQ5VYV7 408 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 CES4AQ5XG92 561 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 DUPD1Q68J44 220 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TTC19Q6DKK2 380 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM166AQ6J272 317 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PNCKQ6P2M8 343 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM173BQ6P4H8 233 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF730Q6ZMV8 503 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 MEX3BQ6ZN04 569 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 CDHR3Q6ZTQ4 885 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TPGS1Q6ZTW0 290 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 EIF3MQ7L2H7 374 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 MTERF4Q7Z6M4 381 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 NAXDQ8IW45 347 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 DCUN1D3Q8IWE4 304 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 LAX1Q8IWV1 398 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ARFGAP2Q8N6H7 521 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ALLCQ8N6M5 410 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RNF148Q8N7C7 305 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC38A9Q8NBW4 561 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC37A3Q8NCC5 494 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 BHLHE23Q8NDY6 225 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 OR4D10Q8NGI6 311 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 OR52K2Q8NGK3 314 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SECTM1Q8WVN6 248 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 AKR1E2Q96JD6 320 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SGK494Q96LW2 274 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PGLYRP2Q96PD5 576 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 COPS8Q99627 209 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 BTBD10Q9BSF8 475 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 APOOQ9BUR5 198 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM109Q9BVC6 243 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 DGCR6LQ9BY27 220 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 THAP2Q9H0W7 228 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 UBQLN3Q9H347 655 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 WDR54Q9H977 334 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 FGF21Q9NSA1 209 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 RBM22Q9NW64 420 aaKnown RBP eCLIP1.71□□□□□ -2.144e-6■■■■□ 24.2
SMCHD1-211ENST00000584897 ZNF224Q9NZL3 707 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TINAGQ9UJW2 476 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SNX12Q9UMY4 172 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 MRPS33Q9Y291 106 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 BTRCQ9Y297 605 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PLEKHA6Q9Y2H5 1048 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 MMACHCQ9Y4U1 282 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TEX264Q9Y6I9 313 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 IQANK1A0A1B0GTG1 560 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 FEZF1A0PJY2 475 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GSAPA4D1B5 854 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 EI24O14681 340 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ADAM12O43184 909 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TBX19O60806 448 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 MTRF1O75570 445 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ATP6AP2O75787 350 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 YES1P07947 543 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 NEFHP12036 1026 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 UQCRBP14927 111 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 CMPK1P30085 196 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GPR1P46091 355 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GNPDA1P46926 289 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SPINT3P49223 89 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PRLHRP49683 370 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ACTR3P61158 418 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 ADORA2A-AS1P86434 159 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 MSLNQ13421 630 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 NFATC2Q13469 925 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 PIP5KL1Q5T9C9 394 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 STEAP4Q687X5 459 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 OLFML2AQ68BL7 652 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TCEAL6Q6IPX3 200 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 EMBQ6PCB8 327 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 BTNL8Q6UX41 500 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 GCNT7Q6ZNI0 430 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM17Q86X19 198 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC30A8Q8IWU4 369 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 APCDD1Q8J025 514 aa1.71□□□□□ -2.14
SMCHD1-211ENST00000584897 LINC00518Q8N0U6 118 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms