RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 TMCC2O75069 709 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 DCTN3O75935 186 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 COX4I1P13073 169 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 HOXB9P17482 250 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GPX2P18283 190 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CCNA2P20248 432 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CXCR1P25024 350 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 FKBP2P26885 142 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 POLR2HP52434 150 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CARD18P57730 90 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GUSBP1Q15486 140 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CLEC12BQ2HXU8 276 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 STAC2Q6ZMT1 411 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 ARMC8Q8IUR7 673 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 POU5F2Q8N7G0 328 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 ZNF611Q8N823 705 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 FAM71CQ8NEG0 241 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 OR8J3Q8NGG0 315 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 OR6K3Q8NGY3 331 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 OR10A6Q8NH74 314 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 POC1BQ8TC44 478 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 AKAP1Q92667 903 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CPNE4Q96A23 557 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 LRRC58Q96CX6 371 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 DDIT4LQ96D03 193 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 RCN3Q96D15 328 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 OR5B2Q96R09 309 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 ACTR6Q9GZN1 396 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 PIF1Q9H611 641 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 EFCAB1Q9HAE3 211 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 FANCFQ9NPI8 374 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 ACER3Q9NUN7 267 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 LAMP3Q9UQV4 416 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 AP3M1Q9Y2T2 418 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 ARID1AO14497 2285 aa11.68□□□□□ -0.54
CDK5RAP3-234ENST00000584525 DSPPQ9NZW4 1301 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CDHR4A6H8M9 788 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TP53P04637 393 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GKN3PP0CG01 181 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 DRD4P21917 467 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 RPS4Y1P22090 263 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 PRKAR1BP31321 381 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 NUDT2P50583 147 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 RGS8P57771 180 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 RPS4XP62701 263 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CSNK2A1P68400 391 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 KRTAP1-1Q07627 177 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 EPS8Q12929 822 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TMEM44Q2T9K0 475 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 SLC25A53Q5H9E4 307 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 WBP2NLQ6ICG8 309 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 NANOGP8Q6NSW7 305 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 ERICH5Q6P6B1 374 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 PATL1Q86TB9 770 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 SERPINA11Q86U17 422 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GGNQ86UU5 652 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 RASSF5Q8WWW0 418 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 OSTF1Q92882 214 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 IKZF5Q9H5V7 419 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 NANOGQ9H9S0 305 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CTPS2Q9NRF8 586 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CHRNA9Q9UGM1 479 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 ARL2BPQ9Y2Y0 163 aa11.67□□□□□ -0.54
CDK5RAP3-234ENST00000584525 SULT2B1O00204 365 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 FBP2O00757 339 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 NDUFAB1O14561 156 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 AP3D1O14617 1153 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GSTA4O15217 222 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 SS18L1O75177 396 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 IFNA2P01563 188 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 ENPP1P22413 925 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GTF2E2P29084 291 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 SLC1A3P43003 542 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 MXRA7P84157 204 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 SELPLGQ14242 412 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CTU2Q2VPK5 515 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TMEM201Q5SNT2 666 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GKAP1Q5VSY0 366 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 RANBP3LQ86VV4 465 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GTPBP3Q969Y2 492 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TRMT61AQ96FX7 289 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GMPPAQ96IJ6 420 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 NPAS1Q99742 590 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TACO1Q9BSH4 297 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TMEM204Q9BSN7 226 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 REG4Q9BYZ8 158 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 KAT8Q9H7Z6 458 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 EVA1AQ9H8M9 152 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GLRX2Q9NS18 164 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 RLIMQ9NVW2 624 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GPR52Q9Y2T5 361 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GMEB1Q9Y692 573 aa11.66□□□□□ -0.54
CDK5RAP3-234ENST00000584525 PCNX3Q9H6A9 2034 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 TMED7-TICAM2A0A0A6YYA0 188 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 A0A0J9YW62 118 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 A0A1W2PNR3 127 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 CLOCKO15516 846 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 GMNNO75496 209 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 IFNA14P01570 189 aa11.65□□□□□ -0.54
CDK5RAP3-234ENST00000584525 IL11P20809 199 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms