RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 EIF3MQ7L2H7 374 aaKnown RBP9.57□□□□□ -0.88
CASC3-208ENST00000583649 OR4F5Q8NH21 305 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 MGARPQ8TDB4 240 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 TMIGD2Q96BF3 282 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 LRRC58Q96CX6 371 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 MRRFQ96E11 262 aaKnown RBP9.57□□□□□ -0.88
CASC3-208ENST00000583649 GIMAP5Q96F15 307 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 AURKBQ96GD4 344 aaPredicted RBP9.57□□□□□ -0.88
CASC3-208ENST00000583649 ZNF764Q96H86 408 aaPredicted RBP9.57□□□□□ -0.88
CASC3-208ENST00000583649 DUX5Q96PT3 197 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 ACTRT3Q9BYD9 372 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 CRLF2Q9HC73 371 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 PCDHGB4Q9UN71 923 aa9.57□□□□□ -0.88
CASC3-208ENST00000583649 POLR3HQ9Y535 204 aaPredicted RBP9.57□□□□□ -0.88
CASC3-208ENST00000583649 TMEM129A0AVI4 362 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 H3BQF6 201 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 PPP6CO00743 305 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 PIN1P1O15428 100 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 OIP5O43482 229 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 HMGN2P05204 90 aaKnown RBP9.56□□□□□ -0.88
CASC3-208ENST00000583649 CALCRP30988 508 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 LSP1P33241 339 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 PCGF2P35227 344 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 PHBP35232 272 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 H3F3AP84243 136 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 GALK2Q01415 458 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 GUCY2DQ02846 1103 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 CAV1Q03135 178 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 HGFACQ04756 655 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 NPRL3Q12980 569 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 SLC17A1Q14916 467 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 TRMT5Q32P41 509 aaKnown RBP9.56□□□□□ -0.88
CASC3-208ENST00000583649 NDUFAF6Q330K2 333 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 SPDYE7PQ495Y7 208 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 TEX35Q5T0J7 233 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 GKAP1Q5VSY0 366 aaPredicted RBP9.56□□□□□ -0.88
CASC3-208ENST00000583649 TMEM225Q6GV28 225 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 KRT80Q6KB66 452 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 NOXRED1Q6NXP6 359 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 LEG1Q6P5S2 330 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 PAQR6Q6TCH4 344 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 RPS27LQ71UM5 84 aaKnown RBP9.56□□□□□ -0.88
CASC3-208ENST00000583649 SPATC1Q76KD6 591 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 REC114Q7Z4M0 266 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 ST7LQ8TDW4 575 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 RAB8BQ92930 207 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 C16orf58Q96GQ5 468 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 SLC30A2Q9BRI3 323 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 NMUR2Q9GZQ4 415 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 PLEK2Q9NYT0 353 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 MID2Q9UJV3 735 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 PPP2R2CQ9Y2T4 447 aa9.56□□□□□ -0.88
CASC3-208ENST00000583649 IGHV2OR16-5A0A0B4J2B6 119 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 A0A1W2PPW3 197 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 DUXAA6NLW8 204 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 A8MT66 165 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 CLDN25C9JDP6 229 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 TP73O15350 636 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 RSL1D1O76021 490 aaKnown RBP9.55□□□□□ -0.88
CASC3-208ENST00000583649 LGI1O95970 557 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 AK1P00568 194 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 HPXP02790 462 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 UBTFL6P0CB48 400 aaPredicted RBP9.55□□□□□ -0.88
CASC3-208ENST00000583649 TCN1P20061 433 aaPredicted RBP9.55□□□□□ -0.88
CASC3-208ENST00000583649 MDKP21741 143 aaPredicted RBP9.55□□□□□ -0.88
CASC3-208ENST00000583649 PAFAH1B1P43034 410 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 CAPZA2P47755 286 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 RNF144AP50876 292 aaPredicted RBP9.55□□□□□ -0.88
CASC3-208ENST00000583649 LCP2Q13094 533 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 PRSS53Q2L4Q9 553 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 PCGF3Q3KNV8 242 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 GLIPR1L2Q4G1C9 344 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.55□□□□□ -0.88
CASC3-208ENST00000583649 PDZK1Q5T2W1 519 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 R3HCC1LQ7Z5L2 792 aaKnown RBP9.55□□□□□ -0.88
CASC3-208ENST00000583649 GPAT4Q86UL3 456 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 OR56A1Q8NGH5 318 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 OIT3Q8WWZ8 545 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 BCL2L2Q92843 193 aaPredicted RBP9.55□□□□□ -0.88
CASC3-208ENST00000583649 RAB1CQ92928 201 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 CIDECQ96AQ7 238 aaPredicted RBP9.55□□□□□ -0.88
CASC3-208ENST00000583649 OTUB1Q96FW1 271 aaPredicted RBP9.55□□□□□ -0.88
CASC3-208ENST00000583649 CCDC106Q9BWC9 280 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 MS4A7Q9GZW8 240 aaPredicted RBP9.55□□□□□ -0.88
CASC3-208ENST00000583649 REEP4Q9H6H4 257 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 CTPS2Q9NRF8 586 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 ZDHHC2Q9UIJ5 367 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 KLHL21Q9UJP4 597 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 ZNF225Q9UK10 706 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 SLC35A3Q9Y2D2 325 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 VWFP04275 2813 aa9.55□□□□□ -0.88
CASC3-208ENST00000583649 PRKDCP78527 4128 aaKnown RBP9.54□□□□□ -0.88
CASC3-208ENST00000583649 PPIAL4EA0A075B759 164 aa9.54□□□□□ -0.88
CASC3-208ENST00000583649 A0A096LPE4 126 aa9.54□□□□□ -0.88
CASC3-208ENST00000583649 PPIAL4CA0A0B4J2A2 164 aa9.54□□□□□ -0.88
CASC3-208ENST00000583649 A0A1W2PPZ6 126 aa9.54□□□□□ -0.88
CASC3-208ENST00000583649 ESPNB1AK53 854 aa9.54□□□□□ -0.88
CASC3-208ENST00000583649 PPIAL4DF5H284 164 aa9.54□□□□□ -0.88
CASC3-208ENST00000583649 ZNF208O43345 1280 aa9.54□□□□□ -0.88
CASC3-208ENST00000583649 DNAJA2O60884 412 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms