RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ZSCAN25Q6NSZ9 544 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 SLC39A4Q6P5W5 647 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 PAQR9Q6ZVX9 377 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 ZNF429Q86V71 674 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 SAXO1Q8IYX7 474 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 NKAIN3Q8N8D7 197 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 OR2T33Q8NG76 320 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 PHOSPHO2Q8TCD6 241 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 SDR42E1Q8WUS8 393 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 PRPF19Q9UMS4 504 aaKnown RBP2.22□□□□□ -2.05
COPS3-217ENST00000583160 MYH7BA7E2Y1 1941 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 MYH6P13533 1939 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 RALGAPA2Q2PPJ7 1873 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 MICAL3Q7RTP6 2002 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 LAMA4Q16363 1823 aa2.21□□□□□ -2.05
COPS3-217ENST00000583160 WDR19Q8NEZ3 1342 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.21□□□□□ -2.06
COPS3-217ENST00000583160 RNF113AO15541 343 aaKnown RBP2.21□□□□□ -2.06
COPS3-217ENST00000583160 PRKAB2O43741 272 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 ZBTB14O43829 449 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 AKR7A3O95154 331 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 NDUFB10O96000 172 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 CXCL10P02778 98 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 ASGR1P07306 291 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 MAGP20916 626 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 HTR5AP47898 357 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 CSNK1DP48730 415 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 ZNF674Q2M3X9 581 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 TSPO2Q5TGU0 170 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 ARSKQ6UWY0 536 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 ARMCX2Q7L311 632 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 HSD11B1LQ7Z5J1 315 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 C10orf53Q8N6V4 93 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 ZNF740Q8NDX6 193 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 DYNLL2Q96FJ2 89 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 ELMO2Q96JJ3 720 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 GLT1D1Q96MS3 346 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 NAP1L3Q99457 506 aaPredicted RBP2.21□□□□□ -2.06
COPS3-217ENST00000583160 ARHGDIGQ99819 225 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 RSPO3Q9BXY4 272 aaPredicted RBP2.21□□□□□ -2.06
COPS3-217ENST00000583160 CHIAQ9BZP6 476 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 SIRPDQ9H106 197 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 COG4Q9H9E3 785 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 GDAP2Q9NXN4 497 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 GALPQ9UBC7 116 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 DCDC2Q9UHG0 476 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 BCAP29Q9UHQ4 241 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 RIMS3Q9UJD0 308 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 MAB21L2Q9Y586 359 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 HIVEP2P31629 2446 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 ATG2AQ2TAZ0 1938 aa2.21□□□□□ -2.06
COPS3-217ENST00000583160 NLRC5Q86WI3 1866 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 NKX2-6A6NCS4 301 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 HAS3O00219 553 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 NBR2O15453 112 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 CSF2P04141 144 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 THRBP10828 461 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 GNPDA1P46926 289 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 NUMBP49757 651 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 C17orf67Q0P5P2 114 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 DNAJC21Q5F1R6 531 aaKnown RBP2.2□□□□□ -2.06
COPS3-217ENST00000583160 PAGE3Q5JUK9 113 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 OR8G2PQ6IF36 304 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 RNF165Q6ZSG1 346 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 ADAMTSL2Q86TH1 951 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 ITPRIPQ8IWB1 547 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 TMEM185AQ8NFB2 350 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 OR52I1Q8NGK6 324 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 DNAJA4Q8WW22 397 aaPredicted RBP2.2□□□□□ -2.06
COPS3-217ENST00000583160 IL1F10Q8WWZ1 152 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 OR1E3Q8WZA6 343 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 EEF2KMTQ96G04 330 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 FTHL17Q9BXU8 183 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 DDX47Q9H0S4 455 aaKnown RBP2.2□□□□□ -2.06
COPS3-217ENST00000583160 C2orf40Q9H1Z8 148 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 ALDH8A1Q9H2A2 487 aaPredicted RBP2.2□□□□□ -2.06
COPS3-217ENST00000583160 BOLA2Q9H3K6 86 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 PAK1IP1Q9NWT1 392 aaPredicted RBP2.2□□□□□ -2.06
COPS3-217ENST00000583160 CYP39A1Q9NYL5 469 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 STOX2Q9P2F5 926 aaPredicted RBP2.2□□□□□ -2.06
COPS3-217ENST00000583160 ZNF490Q9ULM2 529 aaPredicted RBP2.2□□□□□ -2.06
COPS3-217ENST00000583160 PIEZO1Q92508 2521 aa2.2□□□□□ -2.06
COPS3-217ENST00000583160 RAD50Q92878 1312 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 BDP1A6H8Y1 2624 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 KIR2DL5BA0A0G2JN68 375 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 KIR2DL5BA0A0G2JPC4 375 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 GJE1A6NN92 205 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 C5orf67F2Z3F1 127 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 H3BTX0 84 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 MPHOSPH10O00566 681 aaKnown RBP2.19□□□□□ -2.06
COPS3-217ENST00000583160 KLF8O95600 359 aaPredicted RBP2.19□□□□□ -2.06
COPS3-217ENST00000583160 IQCF3P0C7M6 154 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 PDHBP11177 359 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 MUTP22033 750 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 NOVA1P51513 510 aaKnown RBP2.19□□□□□ -2.06
COPS3-217ENST00000583160 SRP54P61011 504 aaKnown RBP2.19□□□□□ -2.06
COPS3-217ENST00000583160 MYBPC1Q00872 1141 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 CNTN2Q02246 1040 aa2.19□□□□□ -2.06
COPS3-217ENST00000583160 GFPT1Q06210 699 aaPredicted RBP2.19□□□□□ -2.06
COPS3-217ENST00000583160 NSDHLQ15738 373 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms