RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ACTC1P68032 377 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 RIPK1Q13546 671 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 MXD4Q14582 209 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 IGFL1Q6UW32 110 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 GDPD3Q7L5L3 318 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 CAMK2N1Q7Z7J9 78 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 C12orf56Q8IXR9 622 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 HDDC3Q8N4P3 179 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 RNF182Q8N6D2 247 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 DEDD2Q8WXF8 326 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 MRPS31Q92665 395 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 FCRL1Q96LA6 429 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 KCNK16Q96T55 309 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 SLC35A5Q9BS91 424 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 MRPL13Q9BYD1 178 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 GPR61Q9BZJ8 451 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 POLR1EQ9GZS1 481 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 HSD3B7Q9H2F3 369 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 SUDS3Q9H7L9 328 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 NUDT15Q9NV35 164 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 SIGLEC8Q9NYZ4 499 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 GNG12Q9UBI6 72 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 STAP1Q9ULZ2 295 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 CHMP2BQ9UQN3 213 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 PIN4Q9Y237 131 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 CLCA3PQ9Y6N3 262 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 PPIAL4EA0A075B759 164 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 GSAPA4D1B5 854 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 KRT87PA6NCN2 255 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 PPIAL4DF5H284 164 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 RS1O15537 224 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 MBTPS2O43462 519 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 SCGB2A1O75556 95 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 TRIM16O95361 564 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 LGALS2P05162 132 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 MRPL3P09001 348 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 TSPY4P0CV99 314 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 TSPY10P0CW01 314 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 PPIAL4FP0DN26 164 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 TNNI3P19429 210 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 CYP2F1P24903 491 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 PTGDSP41222 190 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 KIR2DS4P43632 304 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 PLA2G16P53816 162 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 HSD17B7P56937 341 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 CNTN2Q02246 1040 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 BCL7AQ4VC05 210 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 PLBD1Q6P4A8 553 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 ACOT1Q86TX2 421 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 PAQR7Q86WK9 346 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 KRTAP13-1Q8IUC0 172 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 DHRSXQ8N5I4 330 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 OR10A7Q8NGE5 316 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 DTX3LQ8TDB6 740 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 ZNF670Q9BS34 389 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 WDR76Q9H967 626 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 FOLH1BQ9HBA9 442 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 SCN2AQ99250 2005 aa1.72□□□□□ -2.13
SMCHD1-206ENST00000581631 TRDCB7Z8K6 153 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 CCER2I3L3R5 266 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 HIP1O00291 1037 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 ANGPTL7O43827 346 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 CXCL13O43927 109 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 SUPT3HO75486 399 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 LRATO95237 230 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 H2BFMP0C1H6 154 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 TDGF1P13385 188 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 STMN1P16949 149 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 ARF4P18085 180 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 CXCL5P42830 114 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 GLP1RP43220 463 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 TDGF1P3P51864 188 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 AP3M2P53677 418 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 RPS14P62263 151 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 GRB7Q14451 532 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 ATP6AP1Q15904 470 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 RSPO1Q2MKA7 263 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 TP53I3Q53FA7 332 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 LRRC10Q5BKY1 277 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 FRMPD2BQ6IN97 320 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 ZSCAN25Q6NSZ9 544 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF620Q6ZNG0 422 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 LRRC43Q8N309 656 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF615Q8N8J6 731 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF709Q8N972 641 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 CATSPER1Q8NEC5 780 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 STXBP6Q8NFX7 210 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 OR4D9Q8NGE8 314 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 TAAR1Q96RJ0 339 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 ALG12Q9BV10 488 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 KRT23Q9C075 422 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 ING2Q9H160 280 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 IFI27L2Q9H2X8 130 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 CLMPQ9H6B4 373 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 DBNDD1Q9H9R9 158 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 MEAF6Q9HAF1 191 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 SIAEQ9HAT2 523 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 TBK1Q9UHD2 729 aa1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 AK6Q9Y3D8 172 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 HEBP2Q9Y5Z4 205 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms