RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 POLR2J2Q9GZM3 115 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 POLR2J3Q9H1A7 115 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 RBKSQ9H477 322 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 REEP4Q9H6H4 257 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 LRRC40Q9H9A6 602 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 SH2D2AQ9NP31 389 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 HOXC10Q9NYD6 342 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 KIF25Q9UIL4 384 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 NAP1L2Q9ULW6 460 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 ATP10AO60312 1499 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 ABCD4O14678 606 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 MBTPS2O43462 519 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 MED7O43513 233 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 UGT1A9O60656 530 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 SURF6O75683 361 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 BBOX1O75936 387 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 SUPT7LO94864 414 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 DBTP11182 482 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 SHMT2P34897 504 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 TIMM10P62072 90 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 GNB2P62879 340 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 TGFBR3Q03167 851 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 KLRB1Q12918 225 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 MAJINQ3KP22 176 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 C1orf220Q5T0J3 134 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 OR2G6Q5TZ20 316 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 KDELC1Q6UW63 502 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 EFL1Q7Z2Z2 1120 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 SETD7Q8WTS6 366 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 SCFD1Q8WVM8 642 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 IMMP1LQ96LU5 166 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 SUDS3Q9H7L9 328 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 NHEJ1Q9H9Q4 299 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 THUMPD1Q9NXG2 353 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 EXTL2Q9UBQ6 330 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 TRAF3IP3Q9Y228 551 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 V9GY05 133 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 PLEKHH1Q9ULM0 1364 aa3.25□□□□□ -1.89
SMCHD1-205ENST00000581383 SH3TC1Q8TE82 1336 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 TCRBV9S1A1TA0A576 114 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 A6NIZ1 184 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 PCP4L1A6NKN8 68 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 MPHOSPH10O00566 681 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 RTL8CO15255 209 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 PRKAB2O43741 272 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 RAMP3O60896 148 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 ZNF780AO75290 641 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 OXSR1O95747 527 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 HPNP05981 417 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 CAPN1P07384 714 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 NPR2P20594 1047 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 COX7A1P24310 79 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 CD1BP29016 333 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 CCR1P32246 355 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 QARSP47897 775 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 KLK7P49862 253 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 ATP1B3P54709 279 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 RAP1BP61224 184 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 SELENOTP62341 195 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 TLE4Q04727 773 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 IL17AQ16552 155 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 CCDC14Q49A88 953 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 BCL7AQ4VC05 210 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 C1orf146Q5VVC0 180 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 OR52E8Q6IFG1 317 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 IL34Q6ZMJ4 242 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 PGAP1Q75T13 922 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 GDPD3Q7L5L3 318 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 ZNF571Q7Z3V5 609 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 DHDDSQ86SQ9 333 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 Q8N7P7 452 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 BHLHE23Q8NDY6 225 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 OR52H1Q8NGJ2 320 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 OR8J1Q8NGP2 316 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 RPUSD4Q96CM3 377 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 PAGE5Q96GU1 130 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 CLCC1Q96S66 551 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 TSG101Q99816 390 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 MRPL45Q9BRJ2 306 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 PARD6BQ9BYG5 372 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 YY1AP1Q9H869 796 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 FOLH1BQ9HBA9 442 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 ABCB10Q9NRK6 738 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 AIG1Q9NVV5 245 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 ADAM22Q9P0K1 906 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 ADAM28Q9UKQ2 775 aa3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 RPL36Q9Y3U8 105 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-205ENST00000581383 ARHGAP23Q9P227 1491 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 IGHV3OR16-13A0A075B7E8 117 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 IQANK1A0A1B0GTG1 560 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 A0A1B0GVL5 298 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 USP27XA6NNY8 438 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 A8MXQ7 604 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 NBR2O15453 112 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 P04436 131 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 ZNF853P0CG23 659 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 ELK1P19419 428 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 CXCR2P25025 360 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 RFC4P35249 363 aa3.23□□□□□ -1.89
SMCHD1-205ENST00000581383 DDOSTP39656 456 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms