RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 OR11A1Q9GZK7 315 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 FKRPQ9H9S5 495 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 ZNF229Q9UJW7 825 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 ZNF337Q9Y3M9 751 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 CACNA1GO43497 2377 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 TRGV5A0A0B4J1U4 118 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 ZC3H12DA2A288 527 aaKnown RBP9.68□□□□□ -0.86
SS18-213ENST00000579640 UNC119BA6NIH7 251 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 H3BML4 177 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 ERVH48-1M5A8F1 160 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 FZD7O75084 574 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 CH25HO95992 272 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 ACTL6AO96019 429 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 IGHG3P01860 377 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 BGLAPP02818 100 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 CELA3AP09093 270 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 OSMP13725 252 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 POU2F1P14859 743 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 FUT1P19526 365 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 POU3F2P20265 443 aaPredicted RBP9.68□□□□□ -0.86
SS18-213ENST00000579640 MAKP20794 623 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 RPS5P46782 204 aaKnown RBP9.68□□□□□ -0.86
SS18-213ENST00000579640 HSPA13P48723 471 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 NUP107P57740 925 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 BCL2A1Q16548 175 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 TMEM176BQ3YBM2 270 aaPredicted RBP9.68□□□□□ -0.86
SS18-213ENST00000579640 RPL13AP3Q6NVV1 102 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 IZUMO2Q6UXV1 221 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 RASSF6Q6ZTQ3 369 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 MAMDC2Q7Z304 686 aaPredicted RBP9.68□□□□□ -0.86
SS18-213ENST00000579640 SLC46A3Q7Z3Q1 461 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 SLC43A2Q8N370 569 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 C10orf53Q8N6V4 93 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 CLDN22Q8N7P3 220 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 ATP6V1C2Q8NEY4 427 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 NEIL3Q8TAT5 605 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 TAAR8Q969N4 342 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 KLHL15Q96M94 604 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 TAAR6Q96RI8 345 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 PTDSS2Q9BVG9 487 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 TAPBPLQ9BX59 468 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 SLC25A18Q9H1K4 315 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 SLC6A15Q9H2J7 730 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 LDAHQ9H6V9 325 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 NANSQ9NR45 359 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 TRAPPC4Q9Y296 219 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 CORINQ9Y5Q5 1042 aa9.68□□□□□ -0.86
SS18-213ENST00000579640 MPDZO75970 2070 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 DNPH1O43598 174 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 HIST1H2ABP04908 130 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 GTF2E2P29084 291 aaKnown RBP9.67□□□□□ -0.86
SS18-213ENST00000579640 ESRRGP62508 458 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 IL1RL1Q01638 556 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 NADK2Q4G0N4 442 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 CMPK2Q5EBM0 449 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 PDSS1Q5T2R2 415 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 ANKRD34AQ69YU3 496 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 C19orf48Q6RUI8 117 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 KLHL17Q6TDP4 642 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 FAM180AQ6UWF9 173 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 TMPPEQ6ZT21 453 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 ESPNLQ6ZVH7 1005 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 TRILQ7L0X0 811 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 HIST3H2AQ7L7L0 130 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 OAFQ86UD1 273 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 SIAH3Q8IW03 269 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 EXD3Q8N9H8 876 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 TEX19Q8NA77 164 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 HIST1H2ACQ93077 130 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 ABTB1Q969K4 478 aaPredicted RBP9.67□□□□□ -0.86
SS18-213ENST00000579640 MIB2Q96AX9 1013 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 WBP1Q96G27 269 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 ARL5BQ96KC2 179 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 OR5B2Q96R09 309 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 GPA33Q99795 319 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 ASPNQ9BXN1 380 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 GABARAPL3Q9BY60 117 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 NDEL1Q9GZM8 345 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 DEFB127Q9H1M4 99 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 EXO5Q9H790 373 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 TMEM185BQ9H7F4 350 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 ALKBH4Q9NXW9 302 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 SLC6A5Q9Y345 797 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 FREM3P0C091 2139 aa9.67□□□□□ -0.86
SS18-213ENST00000579640 A0A1B0GVC2 190 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 LIPT2A6NK58 231 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 FTCDNL1E5RQL4 147 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 CDC42EP2O14613 210 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 MITFO75030 526 aaPredicted RBP9.66□□□□□ -0.86
SS18-213ENST00000579640 RCBTB2O95199 551 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 PMS2P2O95744 297 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 ASAH2BP0C7U1 165 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 BMP7P18075 431 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 SFTPDP35247 375 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 AQP4P55087 323 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 CSNK2A1P68400 391 aaPredicted RBP9.66□□□□□ -0.86
SS18-213ENST00000579640 SLC35A1P78382 337 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 KLRB1Q12918 225 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 MYBPHQ13203 477 aa9.66□□□□□ -0.86
SS18-213ENST00000579640 ZBED5Q49AG3 693 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms