RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 TRNT1Q96Q11 434 aaKnown RBP9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 NAA11Q9BSU3 229 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 ROPN1BQ9BZX4 212 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 DPY30Q9C005 99 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 C20orf27Q9GZN8 174 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC38A1Q9H2H9 487 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 FKRPQ9H9S5 495 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 ROPN1Q9HAT0 212 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 LPAR3Q9UBY5 353 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC9A8Q9Y2E8 581 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 AMDHD2Q9Y303 409 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 TMED7Q9Y3B3 224 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 ATP23Q9Y6H3 246 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 ZC3H12DA2A288 527 aaKnown RBP9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 LMX1BO60663 402 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 CPSF4O95639 269 aaKnown RBP9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 CHRM4P08173 479 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 BMP4P12644 408 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 RPS4Y1P22090 263 aaKnown RBP9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 TACR3P29371 465 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 PRPS1P60891 318 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 TGFBR3Q03167 851 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 PDCD2Q16342 344 aaPredicted RBP9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 SPANXN4Q5MJ08 99 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 C9orf135Q5VTT2 229 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 CASP12Q6UXS9 341 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 NUDCD3Q8IVD9 361 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 ZNF781Q8N8C0 355 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 ANKFN1Q8N957 763 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 VPS37AQ8NEZ2 397 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 DDIT4LQ96D03 193 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 TEX37Q96LM6 180 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 CCDC115Q96NT0 180 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC35A5Q9BS91 424 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 PIF1Q9H611 641 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 MTHFD2LQ9H903 347 aaPredicted RBP9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 UPB1Q9UBR1 384 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 BTNL2Q9UIR0 455 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 PRDM4Q9UKN5 801 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 PMF1-BGLAPU3KQ54 211 aa9.3□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC35F4A4IF30 521 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 CFAP73A6NFT4 308 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 LIPT2A6NK58 231 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 ATP6V1G2-DDX39BF2Z307 99 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 SERPINE1P05121 402 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 NR4A2P43354 598 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 GZMKP49863 264 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 KHKP50053 298 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 P2RY4P51582 365 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 ABCE1P61221 599 aaKnown RBP9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 EPS8Q12929 822 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 MAPK11Q15759 364 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 SYPL1Q16563 259 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 GSTA3Q16772 222 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 GPAT3Q53EU6 434 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 LRRC74BQ6ZQY2 392 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 RNF130Q86XS8 419 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 LRRC34Q8IZ02 419 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 TMEM99Q8N816 258 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 POMGNT2Q8NAT1 580 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 OR9K2Q8NGE7 335 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 MSI2Q96DH6 328 aaKnown RBP9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 PKNOX2Q96KN3 472 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 PPP1R36Q96LQ0 422 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 ZNF385AQ96PM9 386 aaKnown RBP9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 SORT1Q99523 831 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 TMEM109Q9BVC6 243 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 SF3B5Q9BWJ5 86 aaKnown RBP9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 SHARPINQ9H0F6 387 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 OBP2BQ9NPH6 170 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 MARCOQ9UEW3 520 aaPredicted RBP9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 HAO1Q9UJM8 370 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 MOKQ9UQ07 419 aa9.29□□□□□ -0.92
CSNK1D-210ENST00000579308 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.29□□□□□ -0.922e-11■■□□□ 12.6
CSNK1D-210ENST00000579308 IGHV1-18A0A0C4DH31 117 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 IGHV4-61A0A0C4DH41 118 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 CCDC154A6NI56 674 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 AQP7P3A6NL99 342 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 NDUFS8O00217 210 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 KLF11O14901 512 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 AKR7A3O95154 331 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 WNT11O96014 354 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 MYZAPP0CAP1 466 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 ZNF16P17020 682 aaPredicted RBP9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 IGFBP5P24593 272 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 IL12AP29459 219 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 CHI3L1P36222 383 aaPredicted RBP9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 SERPINF1P36955 418 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 ACAA2P42765 397 aaKnown RBP9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 PDLIM4P50479 330 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 RPL14P50914 215 aaKnown RBP9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 CLNS1AP54105 237 aaKnown RBP9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 TXNL4AP83876 142 aaKnown RBP9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 CEACAM7Q14002 265 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 CHI3L2Q15782 390 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 DPY19L1Q2PZI1 675 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 FAM174BQ3ZCQ3 159 aa9.28□□□□□ -0.92
CSNK1D-210ENST00000579308 HIKESHIQ53FT3 197 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms