RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ZNF100Q8IYN0 542 aa13.15□□□□□ -0.3
SS18-212ENST00000579061 LSMEM1Q8N8F7 131 aa13.15□□□□□ -0.3
SS18-212ENST00000579061 C11orf65Q8NCR3 313 aa13.15□□□□□ -0.3
SS18-212ENST00000579061 STK35Q8TDR2 534 aa13.15□□□□□ -0.3
SS18-212ENST00000579061 KISS1RQ969F8 398 aaPredicted RBP13.15□□□□□ -0.3
SS18-212ENST00000579061 ALPK1Q96QP1 1244 aa13.15□□□□□ -0.3
SS18-212ENST00000579061 ANGPT4Q9Y264 503 aa13.15□□□□□ -0.3
SS18-212ENST00000579061 NOSIPQ9Y314 301 aaKnown RBP13.15□□□□□ -0.3
SS18-212ENST00000579061 RAI1Q7Z5J4 1906 aaPredicted RBP13.15□□□□□ -0.3
SS18-212ENST00000579061 DSCAMO60469 2012 aa13.15□□□□□ -0.3
SS18-212ENST00000579061 ITPR3Q14573 2671 aa13.15□□□□□ -0.31
SS18-212ENST00000579061 LIPT2A6NK58 231 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 NPIPB7O75200 414 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 NPPAP01160 153 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 VIMP08670 466 aaKnown RBP13.14□□□□□ -0.31
SS18-212ENST00000579061 COX5AP20674 150 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 NR1H2P55055 460 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 PCBP3P57721 371 aaKnown RBP13.14□□□□□ -0.31
SS18-212ENST00000579061 GUCY1A3Q02108 690 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 KEAP1Q14145 624 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 CGB2Q6NT52 195 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 C5orf46Q6UWT4 87 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 C6orf89Q6UWU4 347 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 NET1Q7Z628 596 aaPredicted RBP13.14□□□□□ -0.31
SS18-212ENST00000579061 PTOV1Q86YD1 416 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 CCDC103Q8IW40 242 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 SLC30A8Q8IWU4 369 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 DNAJA4Q8WW22 397 aaPredicted RBP13.14□□□□□ -0.31
SS18-212ENST00000579061 HSD17B8Q92506 261 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 S100PBPQ96BU1 408 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 ZNF775Q96BV0 537 aaPredicted RBP13.14□□□□□ -0.31
SS18-212ENST00000579061 SF3B5Q9BWJ5 86 aaKnown RBP13.14□□□□□ -0.31
SS18-212ENST00000579061 TAPBPLQ9BX59 468 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 RSPO3Q9BXY4 272 aaPredicted RBP13.14□□□□□ -0.31
SS18-212ENST00000579061 TRIM2Q9C040 744 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
SS18-212ENST00000579061 PARPBPQ9NWS1 579 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 PRSS50Q9UI38 385 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 SLC9A8Q9Y2E8 581 aa13.14□□□□□ -0.31
SS18-212ENST00000579061 TEP1Q99973 2627 aaKnown RBP13.13□□□□□ -0.31
SS18-212ENST00000579061 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.13□□□□□ -0.31
SS18-212ENST00000579061 AQP7P3A6NL99 342 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 BBIP1A8MTZ0 92 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 FBP2O00757 339 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 FRS3O43559 492 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 RAMP1O60894 148 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 MRPL33O75394 65 aaKnown RBP13.13□□□□□ -0.31
SS18-212ENST00000579061 BNIP2Q12982 314 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 KLF10Q13118 480 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 CEACAM7Q14002 265 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 CYLC2Q14093 348 aaPredicted RBP13.13□□□□□ -0.31
SS18-212ENST00000579061 SLC17A1Q14916 467 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 MAPRE2Q15555 327 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 CYP51A1Q16850 503 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 TRMT5Q32P41 509 aaKnown RBP13.13□□□□□ -0.31
SS18-212ENST00000579061 C1orf140Q5VVS0 124 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 FBXW9Q5XUX1 488 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 BHLHA15Q7RTS1 189 aaPredicted RBP13.13□□□□□ -0.31
SS18-212ENST00000579061 WFDC8Q8IUA0 241 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 ARMC8Q8IUR7 673 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 APH1AQ96BI3 265 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 DNAJA3Q96EY1 480 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 NGBQ9NPG2 151 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 SAR1AQ9NR31 198 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 KLHL14Q9P2G3 628 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 RPS6KB2Q9UBS0 482 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 TESQ9UGI8 421 aaKnown RBP13.13□□□□□ -0.31
SS18-212ENST00000579061 FLVCR1Q9Y5Y0 555 aa13.13□□□□□ -0.31
SS18-212ENST00000579061 MAP1AP78559 2803 aaPredicted RBP13.12□□□□□ -0.31
SS18-212ENST00000579061 SLC22A2O15244 555 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 TPST1O60507 370 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 FZD7O75084 574 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 MFN2O95140 757 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 VAMP5O95183 116 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 AHSA1O95433 338 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 C8BP07358 591 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 CD53P19397 219 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 EDNRAP25101 427 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 MDH1P40925 334 aaKnown RBP13.12□□□□□ -0.31
SS18-212ENST00000579061 MTPNP58546 118 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 HOXC5Q00444 222 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 SELPLGQ14242 412 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 OR7A5Q15622 319 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 DEFB113Q30KQ7 82 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 OTUD3Q5T2D3 398 aaPredicted RBP13.12□□□□□ -0.31
SS18-212ENST00000579061 FAM91A1Q658Y4 838 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 P2RY8Q86VZ1 359 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 ZNF433Q8N7K0 673 aaPredicted RBP13.12□□□□□ -0.31
SS18-212ENST00000579061 MFSD8Q8NHS3 518 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 TMEM45BQ96B21 275 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 HS3ST6Q96QI5 342 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 PIP5K1AQ99755 562 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 SH3GL1Q99961 368 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 TMEM204Q9BSN7 226 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 BEX4Q9NWD9 120 aaPredicted RBP13.12□□□□□ -0.31
SS18-212ENST00000579061 MALT1Q9UDY8 824 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 SLC13A4Q9UKG4 626 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 ARID1AO14497 2285 aa13.12□□□□□ -0.31
SS18-212ENST00000579061 CADP27708 2225 aa13.11□□□□□ -0.31
SS18-212ENST00000579061 A0A1B0GWA3 101 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms