RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 HNRNPCL1O60812 293 aaKnown RBP10.17□□□□□ -0.78
SSH2-208ENST00000579040 RAMP1O60894 148 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 RAD51DO75771 328 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 TGDSO95455 350 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 BCHEP06276 602 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 GPIP06744 558 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 SOD3P08294 240 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 TFPTP0C1Z6 253 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 HNRNPCL4P0DMR1 293 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 IMPDH2P12268 514 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 CXCR1P25024 350 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 IDUAP35475 653 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 ACAA2P42765 397 aaKnown RBP10.17□□□□□ -0.78
SSH2-208ENST00000579040 COPZ1P61923 177 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 FADDQ13158 208 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 SLC17A1Q14916 467 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 C6orf10Q5SRN2 563 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 AGBL2Q5U5Z8 902 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 PRAMEF8Q5VWM4 474 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 PRAMEF7Q5VXH5 474 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 WBP2NLQ6ICG8 309 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 KLHL17Q6TDP4 642 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 EPGNQ6UW88 154 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 TMEM108Q6UXF1 575 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 CASP12Q6UXS9 341 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 Q71RC1 249 aaPredicted RBP10.17□□□□□ -0.78
SSH2-208ENST00000579040 ATG4DQ86TL0 474 aaPredicted RBP10.17□□□□□ -0.78
SSH2-208ENST00000579040 DTX2Q86UW9 622 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 VRK2Q86Y07 508 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 C1orf162Q8NEQ5 155 aaPredicted RBP10.17□□□□□ -0.78
SSH2-208ENST00000579040 SLC38A5Q8WUX1 472 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 SLC35B4Q969S0 331 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 GTPBP3Q969Y2 492 aaKnown RBP10.17□□□□□ -0.78
SSH2-208ENST00000579040 TMEM45BQ96B21 275 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 C7orf26Q96N11 449 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 SF3B5Q9BWJ5 86 aaKnown RBP10.17□□□□□ -0.78
SSH2-208ENST00000579040 SPATA9Q9BWV2 254 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 AMBRA1Q9C0C7 1298 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 RLIMQ9NVW2 624 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 NPAP1Q9NZP6 1156 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 DCTN4Q9UJW0 460 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 ZNF232Q9UNY5 417 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 ZNF443Q9Y2A4 671 aaPredicted RBP10.17□□□□□ -0.78
SSH2-208ENST00000579040 IFT52Q9Y366 437 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 USH1CQ9Y6N9 552 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 CR1P17927 2039 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 ABCA1O95477 2261 aa10.17□□□□□ -0.78
SSH2-208ENST00000579040 JMJD1CQ15652 2540 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 ZC3H12DA2A288 527 aaKnown RBP10.16□□□□□ -0.78
SSH2-208ENST00000579040 LIPT2A6NK58 231 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 PDLIM1O00151 329 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 ABCD4O14678 606 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 SMAD7O15105 426 aaKnown RBP10.16□□□□□ -0.78
SSH2-208ENST00000579040 IGHV3-9P01782 118 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 ITGA5P08648 1049 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 BMP2P12643 396 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 PTAFRP25105 342 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 NTF4P34130 210 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 CDH11P55287 796 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 STX1BP61266 288 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 TGFBR3Q03167 851 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 FAPQ12884 760 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 PGGHGQ32M88 737 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 GTDC1Q4AE62 458 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 OTUD3Q5T2D3 398 aaPredicted RBP10.16□□□□□ -0.78
SSH2-208ENST00000579040 C17orf78Q8N4C9 275 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 OR9I1Q8NGQ6 314 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 GTF2H4Q92759 462 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 NEUROG1Q92886 237 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 VPS33AQ96AX1 596 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 DNAJA3Q96EY1 480 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 AURKBQ96GD4 344 aaPredicted RBP10.16□□□□□ -0.78
SSH2-208ENST00000579040 TMEM19Q96HH6 336 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 MUS81Q96NY9 551 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 TRAF4Q9BUZ4 470 aaPredicted RBP10.16□□□□□ -0.78
SSH2-208ENST00000579040 ALG2Q9H553 416 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 A4GALTQ9NPC4 353 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 CISD1Q9NZ45 108 aaKnown RBP10.16□□□□□ -0.78
SSH2-208ENST00000579040 MAGED1Q9Y5V3 778 aaPredicted RBP10.16□□□□□ -0.78
SSH2-208ENST00000579040 SLC25A15Q9Y619 301 aa10.16□□□□□ -0.78
SSH2-208ENST00000579040 ALPK2Q86TB3 2170 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 AQP7P3A6NL99 342 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 A8MVM7 634 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 CLIC1O00299 241 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 POLR3GO15318 223 aaPredicted RBP10.15□□□□□ -0.78
SSH2-208ENST00000579040 GKN3PP0CG01 181 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 IRX1P78414 480 aaPredicted RBP10.15□□□□□ -0.78
SSH2-208ENST00000579040 CEACAM7Q14002 265 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 RGNQ15493 299 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 GABRA6Q16445 453 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 CLEC12BQ2HXU8 276 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 RPS26P11Q5JNZ5 115 aaPredicted RBP10.15□□□□□ -0.78
SSH2-208ENST00000579040 ABHD12BQ7Z5M8 362 aaPredicted RBP10.15□□□□□ -0.78
SSH2-208ENST00000579040 CADM2Q8N3J6 435 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 GOLGA6L1Q8N7Z2 621 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 POMGNT2Q8NAT1 580 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 OR52N5Q8NH56 324 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 BBS10Q8TAM1 723 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 TAPBPLQ9BX59 468 aa10.15□□□□□ -0.78
SSH2-208ENST00000579040 PAIP1Q9H074 479 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms