RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 HOXA9P31269 272 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 UBE2MP61081 183 aaKnown RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 VAMP2P63027 116 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 SORDQ00796 357 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 CHRFAM7AQ494W8 412 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 UCN3Q969E3 161 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 TOE1Q96GM8 510 aaKnown RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 HHIPQ96QV1 700 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 INTS14Q96SY0 518 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 GABARAPL3Q9BY60 117 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 PTGES2Q9H7Z7 377 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 KLF15Q9UIH9 416 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 A0A0A6YYH2 397 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 A6NJ64 397 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 HSPA12AO43301 675 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 SYT7O43581 403 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 SSX5O60225 188 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 SELENOFO60613 162 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 KIAA1024LP59773 190 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 EIF5AP63241 154 aaKnown RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 GPR176Q14439 515 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 PRAMEF8Q5VWM4 474 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 PRAMEF7Q5VXH5 474 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 METRNLQ641Q3 311 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 SAXO2Q658L1 398 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 EIF5AL1Q6IS14 154 aaKnown RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 TMEM150AQ86TG1 271 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 OR51D1Q8NGF3 324 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 MS4A6EQ96DS6 147 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 ST6GALNAC5Q9BVH7 336 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 HCAR1Q9BXC0 346 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 CDCA4Q9BXL8 241 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 DLEC1Q9Y238 1755 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 ZNF736B4DX44 427 aaPredicted RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 B4DXG7 233 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 F5H5P2 479 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 CSF3P09919 207 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 UBL4AP11441 157 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 PSMB1P20618 241 aaKnown RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 HOXC12P31275 282 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 PRPS1P60891 318 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 SNRPGP62308 76 aaKnown RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 LTBQ06643 244 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 OR7A5Q15622 319 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 OCLNQ16625 522 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 SLC22A6Q4U2R8 563 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 RDH10Q8IZV5 341 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 FBXL6Q8N531 539 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 OR7G2Q8NG99 324 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 SLC22A8Q8TCC7 542 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 TANKQ92844 425 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 TEAD3Q99594 435 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 BTBD2Q9BX70 525 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 ISG20L2Q9H9L3 353 aaKnown RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 KLHL21Q9UJP4 597 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 HTR1FP30939 366 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 OPRD1P41143 372 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 TRA2BP62995 288 aaKnown RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 TNFRSF17Q02223 184 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 ZP2Q05996 745 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 RAET1LQ5VY80 246 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 FAM109AQ8N4B1 249 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 TMEM185AQ8NFB2 350 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 SPPL3Q8TCT6 385 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 CNRIP1Q96F85 164 aaPredicted RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 CLCC1Q96S66 551 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 NXF5Q9H1B4 397 aaKnown RBP11.16□□□□□ -0.62
ERBB2-206ENST00000578373 ACKR4Q9NPB9 350 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 PLCXD1Q9NUJ7 323 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 COL4A5P29400 1685 aa11.16□□□□□ -0.62
ERBB2-206ENST00000578373 A0A0J9YY10 115 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 TRDV1A0A1B0GX56 115 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 SCO1O75880 301 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 MCCD1P59942 119 aaPredicted RBP11.15□□□□□ -0.62
ERBB2-206ENST00000578373 DGCR2P98153 550 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 KANSL1Q7Z3B3 1105 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 ANKRD53Q8N9V6 530 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 OR1E3Q8WZA6 343 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 SAGE1Q9NXZ1 904 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 CBLCQ9ULV8 474 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 UTRNP46939 3433 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 ZNF850A8MQ14 1090 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 TNFSF12O43508 249 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 KCNK2O95069 426 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 SYPP08247 313 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 MAOAP21397 527 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 FXYD4P59646 89 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 CBFBQ13951 182 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 ZNF836Q6ZNA1 936 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 GTPBP8Q8N3Z3 284 aaPredicted RBP11.15□□□□□ -0.62
ERBB2-206ENST00000578373 FAM26EQ8N5C1 309 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 SFXN5Q8TD22 340 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 MR1Q95460 341 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 DDOQ99489 341 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 NKX3-1Q99801 234 aaPredicted RBP11.15□□□□□ -0.62
ERBB2-206ENST00000578373 NT5DC2Q9H857 520 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 MCCC2Q9HCC0 563 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 C2orf42Q9NWW7 574 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 NEU3Q9UQ49 428 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms