RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 C15orf41Q9Y2V0 281 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 SAMHD1Q9Y3Z3 626 aaKnown RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 BSNQ9UPA5 3926 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 MAP1BP46821 2468 aaKnown RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 A0A087WUU8 490 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 SH3PXD2BA1X283 911 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 CPSF4LA6NMK7 179 aaKnown RBP7.24□□□□□ -1.25
COPS3-215ENST00000578317 G3V2T6 193 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 NUDT14O95848 222 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 HPNP05981 417 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 GP1BBP13224 206 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 DPP4P27487 766 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 SRD5A2P31213 254 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 CLK1P49759 484 aaKnown RBP7.24□□□□□ -1.25
COPS3-215ENST00000578317 CCR4P51679 360 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 ZNF41P51814 821 aaPredicted RBP7.24□□□□□ -1.25
COPS3-215ENST00000578317 POLR2HP52434 150 aaKnown RBP7.24□□□□□ -1.25
COPS3-215ENST00000578317 MICAQ29983 383 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 PLPPR5Q32ZL2 321 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 LINC00303Q3SY05 128 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 DCST1Q5T197 706 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 ARSKQ6UWY0 536 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 GTPBP8Q8N3Z3 284 aaPredicted RBP7.24□□□□□ -1.25
COPS3-215ENST00000578317 TMCO5AQ8N6Q1 288 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 RBMXL3Q8N7X1 1067 aaKnown RBP7.24□□□□□ -1.25
COPS3-215ENST00000578317 RELTQ969Z4 430 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 ALPK1Q96QP1 1244 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 TMEM43Q9BTV4 400 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 HES7Q9BYE0 225 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 ACKR4Q9NPB9 350 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 KLHL1Q9NR64 748 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 VNN3Q9NY84 501 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 SELENONQ9NZV5 590 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 RPS6KB2Q9UBS0 482 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 OSGIN1Q9UJX0 560 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 TMCC3Q9ULS5 477 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 B3GNT3Q9Y2A9 372 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 NTNG1Q9Y2I2 539 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 TESMINQ9Y4I5 508 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 CSAG2Q9Y5P2 127 aa7.24□□□□□ -1.25
COPS3-215ENST00000578317 SPENQ96T58 3664 aaKnown RBP7.24□□□□□ -1.25
COPS3-215ENST00000578317 A0A0G2JMM0 328 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 TRBV4-1A0A0J9YWV2 114 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 A0A1W2PPB8 328 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 A0A1W2PRS3 328 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 PINLYPA6NC86 204 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 KIR3DP1A8MWS1 328 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 FAM47E-STBD1D6RA91 191 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 G3V3Y1 287 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ZNF208O43345 1280 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 E2F6O75461 281 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 SFTPCP11686 197 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ZNF17P17021 662 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 FUT4P22083 530 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 TACR3P29371 465 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 IFNGR2P38484 337 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 CD97P48960 835 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 SPIBQ01892 262 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 DOC2BQ14184 412 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ZNF169Q14929 603 aaPredicted RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 INAQ16352 499 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 OGFRL1Q5TC84 451 aaPredicted RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 ZNF770Q6IQ21 691 aaPredicted RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 PPP4R4Q6NUP7 873 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 PODNL1Q6PEZ8 512 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 C5orf46Q6UWT4 87 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 MBOAT2Q6ZWT7 520 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 SLC22A16Q86VW1 577 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ADGRG3Q86Y34 549 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 NKAIN4Q8IVV8 208 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 CADM2Q8N3J6 435 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 PACRGLQ8N7B6 248 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 FAM98AQ8NCA5 519 aaKnown RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 TMEM239Q8WW34 195 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 C9orf16Q9BUW7 83 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 TTTY12Q9BZ98 90 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 OR2B2Q9GZK3 357 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 GABARAPL1Q9H0R8 117 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 SEMA6AQ9H2E6 1030 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ZNF703Q9H7S9 590 aaPredicted RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 CTPS2Q9NRF8 586 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 RHCGQ9UBD6 479 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 B4GALT7Q9UBV7 327 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 TMEFF2Q9UIK5 374 aaPredicted RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 SLC7A7Q9UM01 511 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 OAZ3Q9UMX2 235 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 U3KQV3 271 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 PRRC2CQ9Y520 2896 aaKnown RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 PKD1L2Q7Z442 2459 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 TMED7-TICAM2A0A0A6YYA0 188 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 H0YJX3 145 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 K7EM74 188 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 NPIPB7O75200 414 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 CCNB2O95067 398 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 RFPL3SP0C7P2 107 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ANXA8P13928 327 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 ZNF26P17031 533 aaPredicted RBP7.23□□□□□ -1.25
COPS3-215ENST00000578317 CHMP24386 653 aa7.23□□□□□ -1.25
COPS3-215ENST00000578317 CXCR1P25024 350 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms