RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 PLXDC2Q6UX71 529 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 CBLL1Q75N03 491 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 CARM1Q86X55 608 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 KIF18BQ86Y91 864 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 CNEP1R1Q8N9A8 125 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 ACBD4Q8NC06 268 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 OR6S1Q8NH40 331 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 PIGXQ8TBF5 258 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 STARD4Q96DR4 205 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 MPP4Q96JB8 637 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 EPYCQ99645 322 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 OR11A1Q9GZK7 315 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 C1orf21Q9H246 121 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 BCO1Q9HAY6 547 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 FANCFQ9NPI8 374 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 PLSCR4Q9NRQ2 329 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 CD300AQ9UGN4 299 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 RPS6KA6Q9UK32 745 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 SH3GLB1Q9Y371 365 aa12.41□□□□□ -0.42
SNORD3B-1-201ENST00000577988 ZC3H12DA2A288 527 aaKnown RBP12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 TRAPPC13A5PLN9 417 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 NKX2-6A6NCS4 301 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 LIPT2A6NK58 231 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 ZNF724A8MTY0 619 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 A8MXE2 369 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 GPR171O14626 319 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 SMAD9O15198 467 aaKnown RBP12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 CHP2O43745 196 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 YES1P07947 543 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 THRBP10828 461 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 IMPDH2P12268 514 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 FPR1P21462 350 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 IFNA8P32881 189 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 RASGEF1BQ0VAM2 473 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 ENTPD8Q5MY95 495 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 BTLAQ7Z6A9 289 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 DEFB107AQ8IZN7 70 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 FAM162AQ96A26 154 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 WFDC6Q9BQY6 131 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 TMEM43Q9BTV4 400 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 GORASP2Q9H8Y8 452 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 ELOVL5Q9NYP7 299 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 EMC3Q9P0I2 261 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 KLHL13Q9P2N7 655 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 PROCRQ9UNN8 238 aa12.4□□□□□ -0.42
SNORD3B-1-201ENST00000577988 FREM1Q5H8C1 2179 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 IGKV3D-15A0A087WSY6 115 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 EEF1E1-BLOC1S5C9J1V9 151 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 EEF1E1O43324 174 aaKnown RBP12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 HNRNPRO43390 633 aaKnown RBP12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 FZD7O75084 574 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 VAMP5O95183 116 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 CGAP01215 116 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 T-ENOLP0DO92 83 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 IGFBP2P18065 325 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 CPOXP36551 454 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 SLC16A1P53985 500 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 CDH12P55289 794 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 SORDQ00796 357 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 EGR4Q05215 589 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 BNIP2Q12982 314 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 CEACAM7Q14002 265 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 NPTX1Q15818 432 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 IFI44LQ53G44 452 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 FAM69AQ5T7M9 428 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 ABLIM2Q6H8Q1 611 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 STK32CQ86UX6 486 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 RBM15BQ8NDT2 890 aaKnown RBP12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 OR4D11Q8NGI4 311 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 VANGL1Q8TAA9 524 aaPredicted RBP12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 ADAMTS16Q8TE57 1224 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 ABHD3Q8WU67 409 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 GEMIN6Q8WXD5 167 aaKnown RBP12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 TPD52L3Q96J77 140 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 SF3B5Q9BWJ5 86 aaKnown RBP12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 PRR14Q9BWN1 585 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 MAGEL2Q9UJ55 1249 aa12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 PRPF19Q9UMS4 504 aaKnown RBP12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 FLNBO75369 2602 aaKnown RBP12.39□□□□□ -0.43
SNORD3B-1-201ENST00000577988 COL12A1Q99715 3063 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 TRAV36DV7A0A075B6V5 113 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 HTR3EA5X5Y0 456 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 CPSF4LA6NMK7 179 aaKnown RBP12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 OR5F1O95221 314 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 COX6B1P14854 86 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 GRNP28799 593 aaKnown RBP12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 AGTR1P30556 359 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 OR7A5Q15622 319 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 VWA1Q6PCB0 445 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 BEND4Q6ZU67 534 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 FKBP9P1Q75LS8 142 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 RNF217Q8TC41 542 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 POP5Q969H6 163 aaKnown RBP12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 PSD2Q9BQI7 771 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 RBM24Q9BX46 236 aaKnown RBP12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 SLC19A3Q9BZV2 496 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 MUC13Q9H3R2 512 aa12.38□□□□□ -0.43
SNORD3B-1-201ENST00000577988 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms