RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 SONP18583 2426 aaKnown RBP13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 ARFGEF3Q5TH69 2177 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 ZC3H12DA2A288 527 aaKnown RBP13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 NDUFS7O75251 213 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 IGHV4-39P01824 125 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 BCHEP06276 602 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 ITGA5P08648 1049 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 GKN3PP0CG01 181 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 PTNP21246 168 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 CXCR1P25024 350 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 PTAFRP25105 342 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 CRISP3P54108 245 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 FOXG1P55316 489 aaPredicted RBP13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 GSTA3Q16772 222 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 SLC9B1Q4ZJI4 515 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 LIN52Q52LA3 116 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 C9orf135Q5VTT2 229 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 AGAP6Q5VW22 663 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 PAQR6Q6TCH4 344 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 DTX2Q86UW9 622 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 PRIMA1Q86XR5 153 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 VRK2Q86Y07 508 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 OR52P1PQ8NH57 321 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 REG4Q9BYZ8 158 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 GRIP2Q9C0E4 1043 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 RMND5AQ9H871 391 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 MANSC1Q9H8J5 431 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 SLC6A13Q9NSD5 602 aa13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 GDF2Q9UK05 429 aaPredicted RBP13.14□□□□□ -0.31
RN7SL560P-201ENST00000577943 CDHR4A6H8M9 788 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 TMEM247A6NEH6 219 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 M0R1B8 84 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 GPIP06744 558 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 ETFAP13804 333 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 CD40P25942 277 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 DSTNP60981 165 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 MAGOHP61326 146 aaKnown RBP13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 COPZ1P61923 177 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 CEACAM7Q14002 265 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 SLC17A1Q14916 467 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 OR7A5Q15622 319 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 MAPK11Q15759 364 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 GABRA6Q16445 453 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 OTUD3Q5T2D3 398 aaPredicted RBP13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 ZNF836Q6ZNA1 936 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 DEPDC4Q8N2C3 294 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 CADM2Q8N3J6 435 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 ITCHQ96J02 903 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 MAELQ96JY0 434 aaKnown RBP13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 MUS81Q96NY9 551 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 C1QTNF6Q9BXI9 259 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 ADAM19Q9H013 955 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 TPT1P8Q9HAU6 139 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 CACYBPQ9HB71 228 aaKnown RBP13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 BARX1Q9HBU1 254 aaPredicted RBP13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 SLC7A10Q9NS82 523 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 ZIM2Q9NZV7 527 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 DCTN4Q9UJW0 460 aa13.13□□□□□ -0.31
RN7SL560P-201ENST00000577943 E7EQL1 145 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 UBDO15205 165 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 AKR7A3O95154 331 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 TP53P04637 393 aaPredicted RBP13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 ZCCHC18P0CG32 403 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 POLR2JP52435 117 aaKnown RBP13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 MVDP53602 400 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 SLC18A1P54219 525 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 TGFBR3Q03167 851 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 DMTNQ08495 405 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 SPOCK1Q08629 439 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 BNIP2Q12982 314 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 LARS2Q15031 903 aaKnown RBP13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 NRF1Q16656 503 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 GTDC1Q4AE62 458 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 C6orf10Q5SRN2 563 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 TSPO2Q5TGU0 170 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 FBXL14Q8N1E6 418 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 TMEM99Q8N816 258 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 SLC38A5Q8WUX1 472 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 ADAD1Q96M93 576 aaKnown RBP13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 DHRS9Q9BPW9 319 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 TAPBPLQ9BX59 468 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 ARMC7Q9H6L4 198 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 ZNF232Q9UNY5 417 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 ZNF443Q9Y2A4 671 aaPredicted RBP13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 B3GALT5Q9Y2C3 310 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 DSPPQ9NZW4 1301 aa13.12□□□□□ -0.31
RN7SL560P-201ENST00000577943 LIPT2A6NK58 231 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 KIAA1324LA8MWY0 1029 aaPredicted RBP13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 PDLIM1O00151 329 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 SSX4O60224 188 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 THBS1P07996 1170 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 NCF2P19878 526 aaPredicted RBP13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 MPGP29372 298 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 TTKP33981 857 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 ACAA2P42765 397 aaKnown RBP13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 FABP6P51161 128 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 KRTAP1-1Q07627 177 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 RPS26P11Q5JNZ5 115 aaPredicted RBP13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 TMEM225Q6GV28 225 aa13.11□□□□□ -0.31
RN7SL560P-201ENST00000577943 WBP2NLQ6ICG8 309 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms