RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 OTUD3Q5T2D3 398 aaPredicted RBP18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 CASP12Q6UXS9 341 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 DLEU7Q6UYE1 221 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 ZNF704Q6ZNC4 412 aaPredicted RBP18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 TGIF2LYQ8IUE0 185 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 C3orf49Q96BT1 292 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 POTEKPQ9BYX7 375 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 BEX4Q9NWD9 120 aaPredicted RBP18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 ADPRHL2Q9NX46 363 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 RPS6KB2Q9UBS0 482 aa18.7■□□□□ 0.58
HCFC1R1-209ENST00000576921 MRPL33O75394 65 aaKnown RBP18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 AKR7A3O95154 331 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 TROVE2P10155 538 aaKnown RBP eCLIP18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 IGHV1-2P23083 117 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 PRKAR1BP31321 381 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 H3F3AP84243 136 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 NFYCQ13952 458 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 PAQR6Q6TCH4 344 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 HSD17B8Q92506 261 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 SPATA5L1Q9BVQ7 753 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 TAPBPLQ9BX59 468 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 TMEM38AQ9H6F2 299 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 GMEB1Q9Y692 573 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 VPS13CQ709C8 3753 aa18.69■□□□□ 0.58
HCFC1R1-209ENST00000576921 LIPT2A6NK58 231 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 A8MVM7 634 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 PLAUP00749 431 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 CD99P14209 185 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 GPX2P18283 190 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 COX5AP20674 150 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 MTPNP58546 118 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 CYP51A1Q16850 503 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 RUNDC3AQ59EK9 446 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 C1orf140Q5VVS0 124 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 FBXW9Q5XUX1 488 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 C20orf204Q6ZNR8 217 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 ATG4DQ86TL0 474 aaPredicted RBP18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 RETREG3Q86VR2 466 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 TMEM99Q8N816 258 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 NGBQ9NPG2 151 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 FGFR1OP2Q9NVK5 253 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 PRDM4Q9UKN5 801 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 ANGPT4Q9Y264 503 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 SLC9A8Q9Y2E8 581 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 FLVCR1Q9Y5Y0 555 aa18.68■□□□□ 0.58
HCFC1R1-209ENST00000576921 CCT8L1PA6NM43 557 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 SMPD2O60906 423 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 RAD51DO75771 328 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 CNOT4O95628 575 aaKnown RBP18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 GGT1P19440 569 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 NTF4P34130 210 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 NCALDP61601 193 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 ADAM8P78325 824 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 FOXD4Q12950 439 aaPredicted RBP18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 SELPLGQ14242 412 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 GLIPR1L2Q4G1C9 344 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 DHRS4L2Q6PKH6 230 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 GPAT4Q86UL3 456 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 COMTD1Q86VU5 262 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 DPP10Q8N608 796 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 HIPK4Q8NE63 616 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 PIGTQ969N2 578 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 SLC35B4Q969S0 331 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 ANKRD27Q96NW4 1050 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 ZNF607Q96SK3 696 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 CGREF1Q99674 301 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 USB1Q9BQ65 265 aaKnown RBP18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 ASB6Q9NWX5 421 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 SLC13A4Q9UKG4 626 aa18.67■□□□□ 0.58
HCFC1R1-209ENST00000576921 ARID1AO14497 2285 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 ZNF469Q96JG9 3925 aaPredicted RBP18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 CIB4A0PJX0 185 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 ELOA3DA6NLF2 546 aaPredicted RBP18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 TMEM229AB2RXF0 380 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 CLOCKO15516 846 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 TPST1O60507 370 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 AHSA1O95433 338 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 VIMP08670 466 aaKnown RBP18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 FAPQ12884 760 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 SLC17A1Q14916 467 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 PPA1Q15181 289 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 ADRM1Q16186 407 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 ELOA3BQ3SY89 546 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 HSP90B2PQ58FF3 399 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 METTL21CQ5VZV1 264 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 ARMC8Q8IUR7 673 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 ZNF433Q8N7K0 673 aaPredicted RBP18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 WFDC11Q8NEX6 87 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 ELOA3Q8NG57 546 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 OR9K2Q8NGE7 335 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 RSPO3Q9BXY4 272 aaPredicted RBP18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 ESRP2Q9H6T0 727 aaKnown RBP18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 RNF115Q9Y4L5 304 aa18.66■□□□□ 0.58
HCFC1R1-209ENST00000576921 ACANP16112 2415 aa18.65■□□□□ 0.58
HCFC1R1-209ENST00000576921 PRORSD1PA6NEY8 169 aa18.65■□□□□ 0.58
HCFC1R1-209ENST00000576921 AQP7P3A6NL99 342 aa18.65■□□□□ 0.58
HCFC1R1-209ENST00000576921 SERPINB7O75635 380 aa18.65■□□□□ 0.58
HCFC1R1-209ENST00000576921 CD3EP07766 207 aa18.65■□□□□ 0.58
HCFC1R1-209ENST00000576921 HTR2AP28223 471 aa18.65■□□□□ 0.58
HCFC1R1-209ENST00000576921 GTF2E2P29084 291 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms