RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ZNF20P17024 532 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 DCKP27707 260 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 MAP3K8P41279 467 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 SIRPAP78324 504 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 MXD1Q05195 221 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 CBX3Q13185 183 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 STK11Q15831 433 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 GXYLT1Q4G148 440 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 TRIQKQ629K1 86 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 GPR139Q6DWJ6 353 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 SLC25A25Q6KCM7 469 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 MZT2AQ6P582 158 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 PSD4Q8NDX1 1056 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 C1orf216Q8TAB5 229 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 APOBEC4Q8WW27 367 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 ITFG2Q969R8 447 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 ZG16BQ96DA0 208 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 TCF7L1Q9HCS4 588 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 FBXO34Q9NWN3 711 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 POU2F3Q9UKI9 436 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 CNOT11Q9UKZ1 510 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 COL6A6A6NMZ7 2263 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 OR6C70A6NIJ9 312 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 CBR3O75828 277 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 RAB36O95755 333 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 GYPBP06028 91 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 CD59P13987 128 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 NAGAP17050 411 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 PYCR1P32322 319 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 EMDP50402 254 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 OR12D2P58182 307 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 MRPL49Q13405 166 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 JMJD6Q6NYC1 403 aaPredicted RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 CCDC80Q76M96 950 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 AAED1Q7RTV5 226 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 KDM8Q8N371 416 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 POC5Q8NA72 575 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 NEK7Q8TDX7 302 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 PPP1R14AQ96A00 147 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 ULBP2Q9BZM5 246 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 OR11A1Q9GZK7 315 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 CEPT1Q9Y6K0 416 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 TIAF1O95411 115 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 ANXA2P07355 339 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 LIPCP11150 499 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 C4BPBP20851 252 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 ENPP1P22413 925 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 POLR2IP36954 125 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 PRKXP51817 358 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 SELENOVP59797 346 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 GLO1Q04760 184 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 C9orf135Q5VTT2 229 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 ZNF585AQ6P3V2 769 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 ZNF574Q6ZN55 896 aaPredicted RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 BEST3Q8N1M1 668 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 LSM14AQ8ND56 463 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 ENKURQ8TC29 256 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 PTPMT1Q8WUK0 201 aaPredicted RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 CRELD1Q96HD1 420 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 ZNF681Q96N22 645 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 GNRHR2Q96P88 292 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 CNN2Q99439 309 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 MND1Q9BWT6 205 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 ZNF71Q9NQZ8 489 aaPredicted RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 ABCB10Q9NRK6 738 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 A0A087WUU8 490 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 A0A1W2PNR3 127 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 CDHR4A6H8M9 788 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 IGHG1P01857 330 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 STSP08842 583 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 CD36P16671 472 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ZNF26P17031 533 aaPredicted RBP9.25□□□□□ -0.93
SMG6-213ENST00000573166 ETV5P41161 510 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ACTC1P68032 377 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ACTA1P68133 377 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ADAM8P78325 824 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ZNF846Q147U1 533 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 PGGHGQ32M88 737 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 DCAF10Q5QP82 559 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 SHFQ7M4L6 423 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 NUBPLQ8TB37 319 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 TRUB1Q8WWH5 349 aaKnown RBP9.25□□□□□ -0.93
SMG6-213ENST00000573166 ST8SIA1Q92185 356 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 RASL10BQ96S79 203 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 TTYH2Q9BSA4 534 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ENKD1Q9H0I2 346 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 ZNF696Q9H7X3 374 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 PARPBPQ9NWS1 579 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 EXOSC1Q9Y3B2 195 aaKnown RBP9.25□□□□□ -0.93
SMG6-213ENST00000573166 A0A1W2PRQ8 180 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 KIAA0513O60268 411 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 KHDRBS3O75525 346 aaKnown RBP9.25□□□□□ -0.93
SMG6-213ENST00000573166 CYB5AP00167 134 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 MSL3P1P0C860 447 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 CELP19835 753 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 S1PR1P21453 382 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 CLDN17P56750 224 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 MVKQ03426 396 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 RASGEF1BQ0VAM2 473 aa9.25□□□□□ -0.93
SMG6-213ENST00000573166 DND1Q8IYX4 353 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms