RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 EGR1P18146 543 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 FKBP2P26885 142 aaKnown RBP17.23■□□□□ 0.35
CCDC40-206ENST00000572083 CALCRP30988 508 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 SLC1A3P43003 542 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 CCT5P48643 541 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 TUBA1BP68363 451 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 TUBA4AP68366 448 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 NAAAQ02083 359 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 LGALS3BPQ08380 585 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 PCLAFQ15004 111 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 UGT3A2Q3SY77 523 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 TBRG1Q3YBR2 411 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 FAM153CQ494X1 144 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 C1QTNF12Q5T7M4 302 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 TUBA1AQ71U36 451 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 AAED1Q7RTV5 226 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 CLECL1Q8IZS7 167 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 NATD1Q8N6N6 113 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 TMEM45BQ96B21 275 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 DDIT4LQ96D03 193 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 PRPF18Q99633 342 aaKnown RBP17.23■□□□□ 0.35
CCDC40-206ENST00000572083 EXD2Q9NVH0 621 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 PCDHGB4Q9UN71 923 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 TMED7Q9Y3B3 224 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 WDR45Q9Y484 360 aa17.23■□□□□ 0.35
CCDC40-206ENST00000572083 ZC3H12DA2A288 527 aaKnown RBP17.22■□□□□ 0.35
CCDC40-206ENST00000572083 hCG_2039718K7EN88 272 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 LGI1O95970 557 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 CECR9P0C854 216 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 OR12D1P0DN82 309 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 CRHR1P34998 444 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 WHAMMP3Q1A5X7 153 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 ATP6AP1LQ52LC2 224 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 XKR7Q5GH72 579 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 OTUD3Q5T2D3 398 aaPredicted RBP17.22■□□□□ 0.35
CCDC40-206ENST00000572083 IL23RQ5VWK5 629 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 PAQR6Q6TCH4 344 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 SVOPLQ8N434 492 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 ARFGAP2Q8N6H7 521 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 ZIC4Q8N9L1 334 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 POMGNT2Q8NAT1 580 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 FNDC5Q8NAU1 212 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 OR9K2Q8NGE7 335 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 OR1K1Q8NGR3 316 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 ZG16BQ96DA0 208 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 AURKBQ96GD4 344 aaPredicted RBP17.22■□□□□ 0.35
CCDC40-206ENST00000572083 ALKBH3Q96Q83 286 aaPredicted RBP17.22■□□□□ 0.35
CCDC40-206ENST00000572083 OBP2BQ9NPH6 170 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 OSGIN1Q9UJX0 560 aa17.22■□□□□ 0.35
CCDC40-206ENST00000572083 LYNX1G3V0Z9 82 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 NR5A2O00482 541 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 COPEO14579 308 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 KRT33AO76009 404 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 ERCC1P07992 297 aaPredicted RBP17.21■□□□□ 0.35
CCDC40-206ENST00000572083 LYNX1P0DP58 116 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 IFNGR1P15260 489 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 DVL1P1P54792 670 aaPredicted RBP17.21■□□□□ 0.35
CCDC40-206ENST00000572083 UBE2NP61088 152 aaKnown RBP17.21■□□□□ 0.35
CCDC40-206ENST00000572083 FUT5Q11128 374 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 PGS1Q32NB8 556 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 TNFAIP8L2Q6P589 184 aaPredicted RBP17.21■□□□□ 0.35
CCDC40-206ENST00000572083 ANKRD16Q6P6B7 361 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 FRRS1Q6ZNA5 592 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 GPAT4Q86UL3 456 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 RIMKLAQ8IXN7 391 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 C3orf56Q8N813 242 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 ZFAND2BQ8WV99 257 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 XAGE5Q8WWM1 108 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 RAB8BQ92930 207 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 ZMYND19Q96E35 227 aaPredicted RBP17.21■□□□□ 0.35
CCDC40-206ENST00000572083 BOD1Q96IK1 185 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 C3orf30Q96M34 536 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 EXOSC3Q9NQT5 275 aaKnown RBP17.21■□□□□ 0.35
CCDC40-206ENST00000572083 TMEM45AQ9NWC5 275 aa17.21■□□□□ 0.35
CCDC40-206ENST00000572083 A0A096LPE4 126 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 A0A1W2PPZ6 126 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 SH3PXD2BA1X283 911 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 AKR7A3O95154 331 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 PRPS1L1P21108 318 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 TACR3P29371 465 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 HTR3AP46098 478 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 POLR2HP52434 150 aaKnown RBP17.2■□□□□ 0.34
CCDC40-206ENST00000572083 KCNJ10P78508 379 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 RIN1Q13671 783 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 C6orf136Q5SQH8 315 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 OR4F3Q6IEY1 312 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 SPATA21Q7Z572 469 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 ABHD12BQ7Z5M8 362 aaPredicted RBP17.2■□□□□ 0.34
CCDC40-206ENST00000572083 MYPOPQ86VE0 399 aaPredicted RBP17.2■□□□□ 0.34
CCDC40-206ENST00000572083 ZNF786Q8N393 782 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 TMEM99Q8N816 258 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 WDR60Q8WVS4 1066 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 NEU4Q8WWR8 484 aaPredicted RBP17.2■□□□□ 0.34
CCDC40-206ENST00000572083 CNOT9Q92600 299 aaKnown RBP17.2■□□□□ 0.34
CCDC40-206ENST00000572083 ROPN1LQ96C74 230 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 PCDHB14Q9Y5E9 798 aa17.2■□□□□ 0.34
CCDC40-206ENST00000572083 A0A0A6YYJ9 748 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 ZNF587BE7ETH6 402 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 SLCO1B7G3V0H7 640 aa17.19■□□□□ 0.34
CCDC40-206ENST00000572083 ZNF208O43345 1280 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms