RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ZKSCAN8Q15776 578 aaPredicted RBP3.47□□□□□ -1.85
NUP88-202ENST00000570937 ZIC1Q15915 447 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 PDK4Q16654 411 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 PHKG1Q16816 387 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 PPP1R3AQ16821 1122 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 DEFB110Q30KQ9 67 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 C1orf189Q5VU69 101 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 HIST2H2AA3Q6FI13 130 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 SBSNQ6UWP8 590 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 ABHD13Q7L211 337 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 ASPGQ86U10 573 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 THOC6Q86W42 341 aaKnown RBP3.47□□□□□ -1.85
NUP88-202ENST00000570937 PAQR7Q86WK9 346 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 HPS6Q86YV9 775 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 MARVELD2Q8N4S9 558 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 MFSD9Q8NBP5 474 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 CLEC1AQ8NC01 280 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 TRPV3Q8NET8 790 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 OR4K1Q8NGD4 311 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 OR5M8Q8NGP6 311 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 OR2Y1Q8NGV0 311 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 OR2T11Q8NH01 316 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 RHEBL1Q8TAI7 183 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 C9orf43Q8TAL5 461 aaPredicted RBP3.47□□□□□ -1.85
NUP88-202ENST00000570937 METTL21AQ8WXB1 218 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 UBE2E3Q969T4 207 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 ZNF285Q96NJ3 590 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 GBP5Q96PP8 586 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 OR2A5Q96R48 311 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 CDRT15Q96T59 188 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 NRTNQ99748 197 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 RHOXF2Q9BQY4 288 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 CENPKQ9BS16 269 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 FUT8Q9BYC5 575 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 SLC26A1Q9H2B4 701 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 EHD1Q9H4M9 534 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 CAB39LQ9H9S4 337 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 ANKHQ9HCJ1 492 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 A4GALTQ9NPC4 353 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 STARD5Q9NSY2 213 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 GIMAP4Q9NUV9 329 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 C14orf105Q9NVL8 296 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 NINJ2Q9NZG7 142 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 NUDT4Q9NZJ9 180 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 DHCR7Q9UBM7 475 aaKnown RBP3.47□□□□□ -1.85
NUP88-202ENST00000570937 FETUBQ9UGM5 382 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 SLC22A14Q9Y267 594 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 PTRH2Q9Y3E5 179 aaKnown RBP3.47□□□□□ -1.85
NUP88-202ENST00000570937 ANGPTL3Q9Y5C1 460 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 SLC22A7Q9Y694 548 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 ANKRD11Q6UB99 2663 aaPredicted RBP3.47□□□□□ -1.85
NUP88-202ENST00000570937 EPG5Q9HCE0 2579 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 ACACAQ13085 2346 aa3.47□□□□□ -1.85
NUP88-202ENST00000570937 LOC400499M0QZD8 3231 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 CELSR3Q9NYQ7 3312 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 IGF2RP11717 2491 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 MAP1BP46821 2468 aaKnown RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 COL27A1Q8IZC6 1860 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 CACNA1BQ00975 2339 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 IGKV1-8A0A0C4DH67 115 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 KRT87PA6NCN2 255 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 SYNDIG1LA6NDD5 238 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 ANKUB1A6NFN9 424 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 NCF1BA6NI72 391 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 ARGFXA6NJG6 315 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 NCF1CA8MVU1 366 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 H3BMH7 237 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 PSMD12O00232 456 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 HAT1O14929 419 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 RIPK2O43353 540 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 SMIM24O75264 130 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 KLF7O75840 302 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 PIAS1O75925 651 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 SLU7O95391 586 aaKnown RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 NSA2O95478 260 aaKnown RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 TBX6O95947 436 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 SERPIND1P05546 499 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 C2P06681 752 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 HEXBP07686 556 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 SERPINA6P08185 405 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 ABHD2P08910 425 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 SNRPAP09012 282 aaKnown RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 C1GALT1C1LP0DN25 315 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 GFAPP14136 432 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 NCF1P14598 390 aaPredicted RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 TAC1P20366 129 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 JAK1P23458 1154 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 F8A1P23610 371 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 GABRA5P31644 462 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 OTX2P32243 289 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 OR1D4P47884 311 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 EMP2P54851 167 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 HERV-K104P61576 105 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 NAA20P61599 178 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 STXBP1P61764 594 aaKnown RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 CSNK1G2P78368 415 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 IRF8Q02556 426 aa3.46□□□□□ -1.86
NUP88-202ENST00000570937 SRSF6Q13247 344 aaKnown RBP3.46□□□□□ -1.86
NUP88-202ENST00000570937 RCN2Q14257 317 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms