RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 BPIFA2Q96DR5 249 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SENP5Q96HI0 755 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 COX14Q96I36 57 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 LRR1Q96L50 414 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 VSTM2LQ96N03 204 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 MCEEQ96PE7 176 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 LYSMD1Q96S90 227 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PEBP4Q96S96 227 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CTRCQ99895 268 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SNRNP25Q9BV90 132 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 RAB11FIP5Q9BXF6 653 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 ULBP3Q9BZM4 244 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PRSS22Q9GZN4 317 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CLSTN2Q9H4D0 955 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 DHX35Q9H5Z1 703 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SUDS3Q9H7L9 328 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF665Q9H7R5 613 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 UBTD1Q9HAC8 227 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SLC52A3Q9NQ40 469 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 FAM114A2Q9NRY5 505 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SAMSN1Q9NSI8 373 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PARVAQ9NVD7 372 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 GPATCH2LQ9NWQ4 482 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF224Q9NZL3 707 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 OR6C2Q9NZP2 312 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CRLS1Q9UJA2 301 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 FBXL4Q9UKA2 621 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 DIMT1Q9UNQ2 313 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 RPL26L1Q9UNX3 145 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 TP53TG5Q9Y2B4 290 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PTGDR2Q9Y5Y4 395 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 COLEC10Q9Y6Z7 277 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CACNA1DQ01668 2161 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SHANK1Q9Y566 2161 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 MN1Q10571 1320 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 MED13Q9UHV7 2174 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 UBR4Q5T4S7 5183 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 POLEQ07864 2286 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 LRBAP50851 2863 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ARPC4-TTLL3A0A0A6YYG9 625 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 IGLV5-39A0A0G2JS06 123 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 A0A0J9YYE9 177 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 SERTM2A0A1B0GWG4 89 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 PCP4L1A6NKN8 68 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 C21orf140B9A014 251 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF587BE7ETH6 402 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 NPIPA2E9PIF3 369 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 NPIPB8E9PQR5 432 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 K7EM74 188 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 MLNRO43193 412 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 PAX4O43316 350 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF208O43345 1280 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 XPNPEP2O43895 674 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 KCNJ13O60928 360 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 LRCH4O75427 683 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 SORBS2O94875 1100 aaKnown RBP2.81□□□□□ -1.96
CNOT1-221ENST00000569924 HPRP00739 348 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 AGTP01019 485 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 TRBC1P01850 177 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 IGHEP01854 428 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 IGHV4-31P0DP07 118 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ANXA8P13928 327 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 XRCC1P18887 633 aaPredicted RBP2.81□□□□□ -1.96
CNOT1-221ENST00000569924 NCF2P19878 526 aaPredicted RBP2.81□□□□□ -1.96
CNOT1-221ENST00000569924 TNFRSF1BP20333 461 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 F8A1P23610 371 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ACKR3P25106 362 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 MIPP30301 263 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 UQCRFS1P47985 274 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 KLK7P49862 253 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 SUCLG1P53597 346 aaKnown RBP2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ELLP55199 621 aaPredicted RBP2.81□□□□□ -1.96
CNOT1-221ENST00000569924 GFERP55789 205 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 LGALS3BPQ08380 585 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 Q0VFX4 171 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 RBM39Q14498 530 aaKnown RBP2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ARHGAP19Q14CB8 494 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 EFTUD2Q15029 972 aaKnown RBP eCLIP2.81□□□□□ -1.96
CNOT1-221ENST00000569924 DPYSL2Q16555 572 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 HSP90AA4PQ58FG1 418 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 C1orf185Q5T7R7 199 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ATP1A1-AS1Q5TC04 95 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 MARC1Q5VT66 337 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ANXA8L1Q5VT79 327 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 LRRC66Q68CR7 880 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 PDPK2PQ6A1A2 396 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 C16orf87Q6PH81 154 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 WASH2PQ6VEQ5 465 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 SYT10Q6XYQ8 523 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 RFLNAQ6ZTI6 216 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 GOLGA7Q7Z5G4 137 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 SATL1Q86VE3 508 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 HPS6Q86YV9 775 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 PLD3Q8IV08 490 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 CCDC36Q8IYA8 594 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 UBQLNLQ8IYU4 475 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ATPAF2Q8N5M1 289 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 TEX26Q8N6G2 289 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 ANKFN1Q8N957 763 aa2.81□□□□□ -1.96
CNOT1-221ENST00000569924 DDHD1Q8NEL9 900 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms