RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 LYSMD2Q8IV50 215 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 GPALPP1Q8IXQ4 340 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 LRRC75AQ8NAA5 344 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 NPEPL1Q8NDH3 523 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 OR5M3Q8NGP4 307 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 OR2T27Q8NH04 317 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 OR51A7Q8NH64 312 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 GRHL3Q8TE85 626 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 SAP25Q8TEE9 199 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 SPRYD4Q8WW59 207 aaPredicted RBP4.92□□□□□ -1.62
SF3B3-213ENST00000569687 C3orf49Q96BT1 292 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 SLC30A2Q9BRI3 323 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 KATNB1Q9BVA0 655 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 HCAR1Q9BXC0 346 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 NMNAT2Q9BZQ4 307 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 SEMA4CQ9C0C4 833 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 C6orf62Q9GZU0 229 aaPredicted RBP4.92□□□□□ -1.62
SF3B3-213ENST00000569687 NXF5Q9H1B4 397 aaKnown RBP4.92□□□□□ -1.62
SF3B3-213ENST00000569687 ADGRL4Q9HBW9 690 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 CPNE5Q9HCH3 593 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 EXOSC4Q9NPD3 245 aaKnown RBP4.92□□□□□ -1.62
SF3B3-213ENST00000569687 NRIP3Q9NQ35 241 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 PNO1Q9NRX1 252 aaKnown RBP4.92□□□□□ -1.62
SF3B3-213ENST00000569687 IRAK4Q9NWZ3 460 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 PLEKHB1Q9UF11 243 aaPredicted RBP4.92□□□□□ -1.62
SF3B3-213ENST00000569687 SUSD2Q9UGT4 822 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 PILRBQ9UKJ0 227 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 SRPK3Q9UPE1 567 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 POLHQ9Y253 713 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 SLC6A5Q9Y345 797 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF337Q9Y3M9 751 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 NOX1Q9Y5S8 564 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 MAU2Q9Y6X3 613 aa4.92□□□□□ -1.62
SF3B3-213ENST00000569687 KNL1Q8NG31 2342 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 IGKV1D-42A0A075B6H8 117 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 TRAV27A0A087WT01 109 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 LY6G6EA0A0G2JKS1 128 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 DAPL1A0PJW8 107 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 TMEM221A6NGB7 291 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 OR6C70A6NIJ9 312 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 FAM183AA6NL82 134 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 VSTM2BA6NLU5 285 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 C12orf71A8MTZ7 269 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ALG1L2C9J202 215 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 M0R296 226 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 GTPBP1O00178 669 aaKnown RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 OIP5O43482 229 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 LAMTOR5O43504 91 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 RNF13O43567 381 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 FADS1O60427 444 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 APOL3O95236 402 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 PPP1R3DO95685 299 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 PTTG1O95997 202 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 CD14P08571 375 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ASAH2BP0C7U1 165 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 HPGDP15428 266 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 NAGAP17050 411 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 CELP19835 753 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 CFL1P23528 166 aaKnown RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 F8A1P23610 371 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 EPHA8P29322 1005 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 SDC2P34741 201 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 CD79BP40259 229 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 RFX3P48380 749 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 MTNR1BP49286 362 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 SEPHS1P49903 392 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 EFNA3P52797 238 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 TAS2R43P59537 309 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 FABP5Q01469 135 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF85Q03923 595 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 HSF2Q03933 536 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 CRMP1Q14194 572 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 EBPQ15125 230 aaKnown RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 PON3Q15166 354 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 NR0B2Q15466 257 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 NSDHLQ15738 373 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 CD226Q15762 336 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF74Q16587 644 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 GLYR1Q49A26 553 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 VWA2Q5GFL6 755 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 EMC4Q5J8M3 183 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 SLC35F1Q5T1Q4 408 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 LYSMD4Q5XG99 296 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 STEAP3Q658P3 488 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 PMS2CLQ68D20 193 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 VASNQ6EMK4 673 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 C22orf42Q6IC83 251 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 XKRXQ6PP77 449 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 TSSK4Q6SA08 328 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 TMEM91Q6ZNR0 172 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 OVCH1Q7RTY7 1134 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF554Q86TJ5 538 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 TPRA1Q86W33 373 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 C1orf210Q8IVY1 113 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 MAML2Q8IZL2 1156 aaPredicted RBP4.91□□□□□ -1.62
SF3B3-213ENST00000569687 CACTIN-AS1Q8N1I8 211 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 SYS1Q8N2H4 156 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 CADM2Q8N3J6 435 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 MS4A15Q8N5U1 240 aa4.91□□□□□ -1.62
SF3B3-213ENST00000569687 METTL27Q8N6F8 245 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms