RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ZNF300Q96RE9 604 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 GPATCH1Q9BRR8 931 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 KLHL4Q9C0H6 718 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 FAM107BQ9H098 131 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 PIF1Q9H611 641 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 EMC3Q9P0I2 261 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 TESQ9UGI8 421 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 CSMD1Q96PZ7 3565 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 IGKV3D-15A0A087WSY6 115 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 ELOA3DA6NLF2 546 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 ZNF716A6NP11 495 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 GPR171O14626 319 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 SNX3O60493 162 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 LGI1O95970 557 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 OPN1SWP03999 348 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 GPIP06744 558 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 COX4I1P13073 169 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 DRD4P21917 467 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 HTR2AP28223 471 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 OR3A2P47893 321 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 SLC16A1P53985 500 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 NCALDP61601 193 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 GNGT1P63211 74 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 CEACAM7Q14002 265 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 VEZF1Q14119 521 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 DUSP7Q16829 419 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 ELOA3BQ3SY89 546 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 ERICH5Q6P6B1 374 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 ULK3Q6PHR2 472 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 PAQR6Q6TCH4 344 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 TFAP2EQ6VUC0 442 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 STAC2Q6ZMT1 411 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 CCDC80Q76M96 950 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 GALNT5Q7Z7M9 940 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 CCDC103Q8IW40 242 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 ELOA3Q8NG57 546 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 RASSF5Q8WWW0 418 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 ZNF775Q96BV0 537 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 ZNF583Q96ND8 569 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 MED18Q9BUE0 208 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 TAPBPLQ9BX59 468 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 POLDIP3Q9BY77 421 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 CLEC4MQ9H2X3 399 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 EFCAB1Q9HAE3 211 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 TMEM27Q9HBJ8 222 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 ZNF226Q9NYT6 803 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 AP3M1Q9Y2T2 418 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 GPR52Q9Y2T5 361 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 TESMINQ9Y4I5 508 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 CSMD2Q7Z408 3487 aa12.27□□□□□ -0.45
HERPUD1-218ENST00000569569 HEATR1Q9H583 2144 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 MYO9AB2RTY4 2548 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 A0A1B0GWA3 101 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 LIPT2A6NK58 231 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 TMEM229AB2RXF0 380 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 ZNF814B7Z6K7 855 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 AIM2O14862 343 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 NPIPB7O75200 414 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 PNMTP11086 282 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 PPP3CBP16298 524 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 PSMB1P20618 241 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 CCKARP32238 428 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 OR1Q1Q15612 314 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 OR7A5Q15622 319 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 ALG10BQ5I7T1 473 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 C1orf140Q5VVS0 124 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 FBXW10Q5XX13 1052 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 FAM91A1Q658Y4 838 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 C6orf89Q6UWU4 347 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 ARPINQ7Z6K5 226 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 RANBP3LQ86VV4 465 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 TREML1Q86YW5 311 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 GABRG1Q8N1C3 465 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 SLC47A1Q96FL8 570 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 ARHGDIGQ99819 225 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 WFDC6Q9BQY6 131 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 PRR14Q9BWN1 585 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 HDHD5Q9BXW7 423 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 MYLK2Q9H1R3 596 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 OR10A4Q9H209 315 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 SELENONQ9NZV5 590 aa12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 NOSIPQ9Y314 301 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-218ENST00000569569 ALPK2Q86TB3 2170 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 TPST2O60704 377 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 FMO6PO60774 539 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 RAMP1O60894 148 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 AKR7A3O95154 331 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 AHSA1O95433 338 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 CNOT4O95628 575 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 EGR4Q05215 589 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 P2RY6Q15077 328 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 NRF1Q16656 503 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 OTUD3Q5T2D3 398 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 SFRP5Q5T4F7 317 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 ANKRD34AQ69YU3 496 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 C5orf46Q6UWT4 87 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 Q6ZT83 130 aa12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 LSRQ86X29 649 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 CXorf67Q86X51 503 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-218ENST00000569569 ZNF100Q8IYN0 542 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms