RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 SLC38A6Q8IZM9 456 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 ARIH2OSQ8N7S6 290 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 SAMD12Q8N8I0 201 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 OR5J2Q8NH18 312 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 LMX1AQ8TE12 382 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 KLHDC7BQ96G42 594 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF486Q96H40 463 aaPredicted RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 ZC3H10Q96K80 434 aaKnown RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 WDFY2Q96P53 400 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 MNTQ99583 582 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 NDC1Q9BTX1 674 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 FBRSQ9HAH7 460 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 TRIM36Q9NQ86 728 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 EXOGQ9Y2C4 368 aaKnown RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 ENTPD2Q9Y5L3 495 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 A0A0G2JMP0 313 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 SPTY2D1-AS1A0A0U1RR47 76 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 A0A0X1KG70 313 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 FAM240BA0A1B0GVZ2 78 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 CDC14CA4D256 554 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 SEC16AO15027 2179 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 CSTAP01040 98 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 IGHA1P01876 353 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 HOXC4P09017 264 aaPredicted RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 HIST1H1CP16403 213 aaKnown RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 ELK1P19419 428 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 MYL9P24844 172 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 PSMB10P40306 273 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 GFERP55789 205 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 RAB38P57729 211 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 PPP3R1P63098 170 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 C11orf88Q6PI97 169 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 KIRREL2Q6UWL6 708 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 RNF44Q7L0R7 432 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 KRT74Q7RTS7 529 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 PRR22Q8IZ63 422 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 C19orf47Q8N9M1 422 aaKnown RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 PLPP7Q8NBV4 271 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 OR4M2Q8NGB6 313 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 OR6F1Q8NGZ6 308 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 BRIX1Q8TDN6 353 aaKnown RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 DGAT2Q96PD7 388 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 SLC38A3Q99624 504 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 COQ7Q99807 217 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 IFT22Q9H7X7 185 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 PRTFDC1Q9NRG1 225 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 CMC2Q9NRP2 79 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 PNO1Q9NRX1 252 aaKnown RBP8.06□□□□□ -1.12
LINC00558-201ENST00000569422 MED17Q9NVC6 651 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 MMP17Q9ULZ9 603 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 RASD1Q9Y272 281 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 SSUH2Q9Y2M2 353 aa8.06□□□□□ -1.12
LINC00558-201ENST00000569422 A0A087WV62 115 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 B4DXG7 233 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 MCIDASD6RGH6 385 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 HCN1O60741 890 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 RGS9O75916 674 aaPredicted RBP8.05□□□□□ -1.12
LINC00558-201ENST00000569422 SLC35E2P0CK97 266 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 FGF9P31371 208 aaPredicted RBP8.05□□□□□ -1.12
LINC00558-201ENST00000569422 MAGEB1P43366 347 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 SLC26A5P58743 744 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 QPRTQ15274 297 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 WDR73Q6P4I2 378 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 LNX2Q8N448 690 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 GDPD1Q8N9F7 314 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 OR52N1Q8NH53 320 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 DNAJA4Q8WW22 397 aaPredicted RBP8.05□□□□□ -1.12
LINC00558-201ENST00000569422 NMNAT3Q96T66 252 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 STACQ99469 402 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 PLSCR3Q9NRY6 295 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 PAQR5Q9NXK6 330 aaPredicted RBP8.05□□□□□ -1.12
LINC00558-201ENST00000569422 TICRRQ7Z2Z1 1910 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 A0A0B4J2E0 115 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 KIR2DS5A0A0G2JLQ3 304 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 A0A0G2JNG1 304 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 A0A1B0GX12 115 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 SLC22A31A6NKX4 558 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 C17orf51A8MQB3 221 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 KIR2DS3K7RE56 304 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 LYPD3O95274 346 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 MT-ND5P03915 603 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 SBK2P0C263 348 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 HK1P19367 917 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 ERVK-25P63136 954 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 KIR2DS5Q14953 304 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 RAB30Q15771 203 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 TMEM44Q2T9K0 475 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 DEFB133Q30KQ1 61 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 SLC25A35Q3KQZ1 300 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 GARNL3Q5VVW2 1013 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 NPSR1Q6W5P4 371 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 ESPNLQ6ZVH7 1005 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 C16orf52Q8NHV5 167 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 SETD6Q8TBK2 473 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 ASB12Q8WXK4 309 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 KISS1RQ969F8 398 aaPredicted RBP8.05□□□□□ -1.12
LINC00558-201ENST00000569422 TIMP4Q99727 224 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 LRRC61Q9BV99 259 aa8.05□□□□□ -1.12
LINC00558-201ENST00000569422 DNAJB12Q9NXW2 375 aaKnown RBP8.05□□□□□ -1.12
LINC00558-201ENST00000569422 GNG8Q9UK08 70 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms