RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 DNPH1O43598 174 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 PLGP00747 810 aaPredicted RBP11.69□□□□□ -0.54
CNOT1-217ENST00000569263 LDLRP01130 860 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 FABP3P05413 133 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 TMIGD3P0DMS9 266 aaPredicted RBP11.69□□□□□ -0.54
CNOT1-217ENST00000569263 THRBP10828 461 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 IMPDH2P12268 514 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 RPS5P46782 204 aaKnown RBP11.69□□□□□ -0.54
CNOT1-217ENST00000569263 SLC35A1P78382 337 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 ST3GAL3Q11203 375 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 FOXD4Q12950 439 aaPredicted RBP11.69□□□□□ -0.54
CNOT1-217ENST00000569263 OR7A5Q15622 319 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 SEM1Q6ZVN7 128 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 FCRLAQ7L513 359 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 P3H2Q8IVL5 708 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 OFCC1Q8IZS5 231 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 GCNT2Q8N0V5 402 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 SSC4DQ8WTU2 575 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 ASB5Q8WWX0 329 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 ROBO4Q8WZ75 1007 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 SDCCAG3Q96C92 435 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 INTS12Q96CB8 462 aaKnown RBP11.69□□□□□ -0.54
CNOT1-217ENST00000569263 SLC25A36Q96CQ1 311 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 ZFP3Q96NJ6 502 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 TMEM43Q9BTV4 400 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 C6orf203Q9P0P8 240 aaPredicted RBP11.69□□□□□ -0.54
CNOT1-217ENST00000569263 Q9UFV3 132 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 SLC7A8Q9UHI5 535 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 A4GNTQ9UNA3 340 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 POMPQ9Y244 141 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 RNF6Q9Y252 685 aa11.69□□□□□ -0.54
CNOT1-217ENST00000569263 DIDO1Q9BTC0 2240 aaKnown RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 IGKV1D-42A0A075B6H8 117 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 TCRBV5S2A0A599 114 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 LIPT2A6NK58 231 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 AQP12BA6NM10 295 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 KPNA4O00629 521 aaPredicted RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 ACOT8O14734 319 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 SMAD9O15198 467 aaKnown RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 OR2T1O43869 369 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 EIF1BO60739 113 aaKnown RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 NPIPB7O75200 414 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 CIB2O75838 187 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 AQP8O94778 261 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 TOXO94900 526 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 RCBTB2O95199 551 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 LYPD3O95274 346 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 THY1P04216 161 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 SEMG1P04279 462 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 RHCEP18577 417 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 FPR1P21462 350 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 CHRNB4P30926 498 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 CEACAM8P31997 349 aaPredicted RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 RBM34P42696 430 aaKnown RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 VLDLRP98155 873 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 EGR4Q05215 589 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 CHRNB3Q05901 458 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 TRAM2Q15035 370 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 RNPS1Q15287 305 aaKnown RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 FAM98BQ52LJ0 330 aaKnown RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 FAM69AQ5T7M9 428 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 GTF2IRD2BQ6EKJ0 949 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 WDR88Q6ZMY6 472 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 MRGPRGQ86SM5 289 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 GTF2IRD2Q86UP8 949 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 SPATA24Q86W54 205 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 CCDC71Q8IV32 467 aaPredicted RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 AQP12AQ8IXF9 295 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 SLC43A2Q8N370 569 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 ZNF808Q8N4W9 903 aaPredicted RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 C10orf53Q8N6V4 93 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 RNF128Q8TEB7 428 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 KTI12Q96EK9 354 aaPredicted RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 ZNF300Q96RE9 604 aaPredicted RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 NAA11Q9BSU3 229 aaPredicted RBP11.68□□□□□ -0.54
CNOT1-217ENST00000569263 MAGIXQ9H6Y5 334 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 RNF122Q9H9V4 155 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 RHCGQ9UBD6 479 aa11.68□□□□□ -0.54
CNOT1-217ENST00000569263 DVL2O14641 736 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 CTSSP25774 331 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 CTBP2P56545 445 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 SIRPAP78324 504 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 SRSF1Q07955 248 aaKnown RBP eCLIP11.67□□□□□ -0.54
CNOT1-217ENST00000569263 FGD3Q5JSP0 725 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 OTUD3Q5T2D3 398 aaPredicted RBP11.67□□□□□ -0.54
CNOT1-217ENST00000569263 C1orf146Q5VVC0 180 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 XKRXQ6PP77 449 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 PAQR6Q6TCH4 344 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 LINC00114Q6XXX2 140 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 ASRGL1Q7L266 308 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 ZDHHC21Q8IVQ6 265 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 NKAIN4Q8IVV8 208 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 CNEP1R1Q8N9A8 125 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 NAXEQ8NCW5 288 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 MFSD8Q8NHS3 518 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 PIGXQ8TBF5 258 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 CA5BP1Q8WTZ4 195 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 ABHD3Q8WU67 409 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 TMEM255BQ8WV15 326 aa11.67□□□□□ -0.54
CNOT1-217ENST00000569263 TMEM239Q8WW34 195 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms