RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 OR7E24Q6IFN5 339 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 FRRS1Q6ZNA5 592 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 EIF3MQ7L2H7 374 aaKnown RBP12.9□□□□□ -0.34
USB1-214ENST00000568848 C16orf62Q7Z3J2 963 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 AENQ8WTP8 325 aaKnown RBP12.9□□□□□ -0.34
USB1-214ENST00000568848 XAGE5Q8WWM1 108 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 TMEM234Q8WY98 164 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 COQ8BQ96D53 544 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 ZHX1-C8orf76Q96EF9 292 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 AURKBQ96GD4 344 aaPredicted RBP12.9□□□□□ -0.34
USB1-214ENST00000568848 DUSP26Q9BV47 211 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 TPK1Q9H3S4 243 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 TMEFF2Q9UIK5 374 aaPredicted RBP12.9□□□□□ -0.34
USB1-214ENST00000568848 OSGIN1Q9UJX0 560 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 TMED7Q9Y3B3 224 aa12.9□□□□□ -0.34
USB1-214ENST00000568848 WNT9BO14905 357 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 ZNF500O60304 480 aaPredicted RBP12.89□□□□□ -0.35
USB1-214ENST00000568848 SPAG7O75391 227 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 STX11O75558 287 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 CPSF4O95639 269 aaKnown RBP12.89□□□□□ -0.35
USB1-214ENST00000568848 NUDT17P0C025 328 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 DAOP14920 347 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 EGR1P18146 543 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 APOBEC1P41238 236 aaKnown RBP12.89□□□□□ -0.35
USB1-214ENST00000568848 SELENOPP49908 381 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 PRPS1P60891 318 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 HGFACQ04756 655 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 IFFO1Q0D2I5 559 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 SLC17A1Q14916 467 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 MSMPQ1L6U9 139 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 ARHGAP11BQ3KRB8 267 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 C6orf136Q5SQH8 315 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 DEF8Q6ZN54 512 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 GRINAQ7Z429 371 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 RIMKLAQ8IXN7 391 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 CDK20Q8IZL9 346 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 FNDC5Q8NAU1 212 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 SLC25A43Q8WUT9 341 aaPredicted RBP12.89□□□□□ -0.35
USB1-214ENST00000568848 SLC38A2Q96QD8 506 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 NELFAQ9H3P2 528 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 METTL17Q9H7H0 456 aaPredicted RBP12.89□□□□□ -0.35
USB1-214ENST00000568848 TMEM181Q9P2C4 612 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 DCTN4Q9UJW0 460 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 SLC9A8Q9Y2E8 581 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 TMED5Q9Y3A6 229 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 PKD1L1Q8TDX9 2849 aa12.89□□□□□ -0.35
USB1-214ENST00000568848 TRRAPQ9Y4A5 3859 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 NDUFS8O00217 210 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 GPR171O14626 319 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 UPK3AO75631 287 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 SEC14L2O76054 403 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 CHEK2O96017 543 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 KRT16P08779 473 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 BMP4P12644 408 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 CREB1P16220 341 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 TACR3P29371 465 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 MPGP29372 298 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 THBS4P35443 961 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 CEACAM7Q14002 265 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 OR7A5Q15622 319 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 OTUD3Q5T2D3 398 aaPredicted RBP12.88□□□□□ -0.35
USB1-214ENST00000568848 KLHL24Q6TFL4 600 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 AAED1Q7RTV5 226 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 GPAT4Q86UL3 456 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 RFLNBQ8N5W9 214 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 ANKFN1Q8N957 763 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 SEMA6DQ8NFY4 1073 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 OR9K2Q8NGE7 335 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 OR4A15Q8NGL6 344 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 OR1K1Q8NGR3 316 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 ARL8AQ96BM9 186 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 ZBTB9Q96C00 473 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 ROPN1LQ96C74 230 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 APOPT1Q96IL0 206 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 SLC17A7Q9P2U7 560 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 LGALS13Q9UHV8 139 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 ZDHHC2Q9UIJ5 367 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 HDGFL3Q9Y3E1 203 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 WDR45Q9Y484 360 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 TGP01266 2768 aa12.88□□□□□ -0.35
USB1-214ENST00000568848 TMEM129A0AVI4 362 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 TMEM114B3SHH9 223 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 H3BQF6 201 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 hCG_2039718K7EN88 272 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 TRIM13O60858 407 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 NAA20P61599 178 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 NAAAQ02083 359 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 LSM12Q3MHD2 195 aaKnown RBP12.87□□□□□ -0.35
USB1-214ENST00000568848 WDR93Q6P2C0 686 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 SSX8Q7RTT4 187 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 SPATA21Q7Z572 469 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 KDM8Q8N371 416 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 RIBC1Q8N443 379 aaPredicted RBP12.87□□□□□ -0.35
USB1-214ENST00000568848 C17orf78Q8N4C9 275 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 C1orf162Q8NEQ5 155 aaPredicted RBP12.87□□□□□ -0.35
USB1-214ENST00000568848 PPP3R2Q96LZ3 170 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 PARD6BQ9BYG5 372 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 PLK3Q9H4B4 646 aa12.87□□□□□ -0.35
USB1-214ENST00000568848 FAM157AC9JC47 383 aa12.86□□□□□ -0.35
USB1-214ENST00000568848 LYPLA1O75608 230 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms