RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	IFNGR2	P38484	337 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	RPS5	P46782	204 aa	Known RBP	13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TPD52	P55327	224 aa	Predicted RBP	13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PER3	P56645	1201 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	NUP107	P57740	925 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ACTR3	P61158	418 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	GK3P	Q14409	553 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PON3	Q15166	354 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FAM69A	Q5T7M9	428 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	C1QL3	Q5VWW1	255 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	NSUN5P2	Q63ZY6	315 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	OR2A2	Q6IF42	318 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZFP1	Q6P2D0	407 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MCEMP1	Q8IX19	187 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	SLC43A2	Q8N370	569 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	RELT	Q969Z4	430 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ADGRG7	Q96K78	797 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ARL5B	Q96KC2	179 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	REEP1	Q9H902	201 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	AP4S1	Q9Y587	144 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PCNX3	Q9H6A9	2034 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZC3H12D	A2A288	527 aa	Known RBP	13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499		J3QKU1	62 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FFAR1	O14842	300 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	HNRNPR	O43390	633 aa	Known RBP	13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	NPIPB7	O75200	414 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FKBP6	O75344	327 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PRSS23	O95084	383 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	LYPD3	O95274	346 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MT-ATP6	P00846	226 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	IGF2	P01344	180 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	IL2RA	P01589	272 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MT-ND1	P03886	318 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	THY1	P04216	161 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	HIST1H2AB	P04908	130 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FCGR1A	P12314	374 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	RRM2	P31350	389 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ERF	P50548	548 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CCNI	Q14094	377 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	KPNB1	Q14974	876 aa	Known RBP	13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	OR7A5	Q15622	319 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	OR2T5	Q6IEZ7	315 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	RPTN	Q6XPR3	784 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	HIST3H2A	Q7L7L0	130 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	NKAIN4	Q8IVV8	208 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	LINC00471	Q8N535	108 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PAPD5	Q8NDF8	572 aa	Known RBP	13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	OR2T29	Q8NH02	315 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TMEM255B	Q8WV15	326 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	HIST1H2AC	Q93077	130 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	SLC25A36	Q96CQ1	311 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	KTI12	Q96EK9	354 aa	Predicted RBP	13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZNF845	Q96IR2	970 aa	Predicted RBP	13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZFP3	Q96NJ6	502 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PRSS27	Q9BQR3	290 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZNF426	Q9BUY5	554 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ASPN	Q9BXN1	380 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	COQ10B	Q9H8M1	238 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MEMO1	Q9Y316	297 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CORIN	Q9Y5Q5	1042 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	DNAJC13	O75165	2243 aa		13.36	□□□□□ -0.27
KLHDC4-223	ENST00000568499	SHANK1	Q9Y566	2161 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CFAP46	Q8IYW2	2715 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	IGKV1D-42	A0A075B6H8	117 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	LIPT2	A6NK58	231 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TNFRSF11B	O00300	401 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	KPNA4	O00629	521 aa	Predicted RBP	13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	LRRTM2	O43300	516 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PLG	P00747	810 aa	Predicted RBP	13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FREM3	P0C091	2139 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FPR1	P21462	350 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TIMP3	P35625	211 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	UQCRFS1	P47985	274 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ARHGDIA	P52565	204 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	AGFG1	P52594	562 aa	Known RBP	13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	EGR4	Q05215	589 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PMPCA	Q10713	525 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	RNPS1	Q15287	305 aa	Known RBP	13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TAF11	Q15544	211 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZNF239	Q16600	458 aa	Known RBP	13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	IQCC	Q4KMZ1	466 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	C4orf17	Q53FE4	359 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	EEF1A1P5	Q5VTE0	462 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PAQR6	Q6TCH4	344 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	C3P1	Q6ZMU1	363 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	WDR88	Q6ZMY6	472 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MBOAT2	Q6ZWT7	520 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FCRLA	Q7L513	359 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TSEN54	Q7Z6J9	526 aa	Known RBP	13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FJX1	Q86VR8	437 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	P3H2	Q8IVL5	708 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	OR52J3	Q8NH60	311 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PIGX	Q8TBF5	258 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	RND1	Q92730	232 aa		13.35	□□□□□ -0.27
KLHDC4-223	ENST00000568499	STMN2	Q93045	179 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms