RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 RNF217Q8TC41 542 aa16.11■□□□□ 0.17
COMMD4-222ENST00000568034 CANT1Q8WVQ1 401 aa16.11■□□□□ 0.17
COMMD4-222ENST00000568034 POP5Q969H6 163 aaKnown RBP16.11■□□□□ 0.17
COMMD4-222ENST00000568034 DOCK7Q96N67 2140 aa16.11■□□□□ 0.17
COMMD4-222ENST00000568034 PAQR5Q9NXK6 330 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-222ENST00000568034 ERRFI1Q9UJM3 462 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-222ENST00000568034 ZNF175Q9Y473 711 aa16.11■□□□□ 0.17
COMMD4-222ENST00000568034 MYO18BQ8IUG5 2567 aa16.11■□□□□ 0.17
COMMD4-222ENST00000568034 NCOA6Q14686 2063 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-222ENST00000568034 A0A1B0GUH1 482 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 LIPT2A6NK58 231 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 ZNF814B7Z6K7 855 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 AQP8O94778 261 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 IDUAP35475 653 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 ADORA2A-AS1P86434 159 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 LTBQ06643 244 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 PDSS1Q5T2R2 415 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 C1orf146Q5VVC0 180 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 TMEM255BQ8WV15 326 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 WNT2BQ93097 391 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 TAAR8Q969N4 342 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 CPNE4Q96A23 557 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-222ENST00000568034 SLCO4A1Q96BD0 722 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 CCDC120Q96HB5 630 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 PIP5K1AQ99755 562 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 FUZQ9BT04 418 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 FNDC11Q9BVV2 318 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 NMNAT1Q9HAN9 279 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-222ENST00000568034 MEPEQ9NQ76 525 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-222ENST00000568034 TRAPPC4Q9Y296 219 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 PCNX1Q96RV3 2341 aa16.1■□□□□ 0.17
COMMD4-222ENST00000568034 MED12LQ86YW9 2145 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 DIDO1Q9BTC0 2240 aaKnown RBP16.09■□□□□ 0.17
COMMD4-222ENST00000568034 TRAV36DV7A0A075B6V5 113 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 SLC22A20A6NK97 555 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 SULT2B1O00204 365 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 SMAD9O15198 467 aaKnown RBP16.09■□□□□ 0.17
COMMD4-222ENST00000568034 AHSA1O95433 338 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 GPIP06744 558 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 RAP2AP10114 183 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 UMPSP11172 480 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 ITGA2P17301 1181 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 ENPP1P22413 925 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 CEACAM8P31997 349 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-222ENST00000568034 TIMP3P35625 211 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 RBM34P42696 430 aaKnown RBP16.09■□□□□ 0.17
COMMD4-222ENST00000568034 RPS5P46782 204 aaKnown RBP16.09■□□□□ 0.17
COMMD4-222ENST00000568034 AGFG1P52594 562 aaKnown RBP16.09■□□□□ 0.17
COMMD4-222ENST00000568034 CHRNB3Q05901 458 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 TRAM2Q15035 370 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 SF3B4Q15427 424 aaKnown RBP eCLIP16.09■□□□□ 0.17
COMMD4-222ENST00000568034 SGCBQ16585 318 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 FAM98BQ52LJ0 330 aaKnown RBP16.09■□□□□ 0.17
COMMD4-222ENST00000568034 C5orf46Q6UWT4 87 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 CHMP1BQ7LBR1 199 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 CYP4Z1Q86W10 505 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 NAXEQ8NCW5 288 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 RNF128Q8TEB7 428 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 ROBO4Q8WZ75 1007 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 ANKRD19PQ9H560 264 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 SLC5A6Q9Y289 635 aa16.09■□□□□ 0.17
COMMD4-222ENST00000568034 IGHV3-15A0A0B4J1V0 119 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 A0A1W2PRQ8 180 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 CLEC18AA5D8T8 446 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 LRRN3E7EW58 273 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 DNPH1O43598 174 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 PIP5K1CO60331 668 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 RAMP1O60894 148 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 BGLAPP02818 100 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 H1F0P07305 194 aaKnown RBP16.08■□□□□ 0.16
COMMD4-222ENST00000568034 NQO1P15559 274 aaKnown RBP16.08■□□□□ 0.16
COMMD4-222ENST00000568034 FPR1P21462 350 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 P2RY4P51582 365 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 OR2B6P58173 313 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 CSNK2A1P68400 391 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-222ENST00000568034 H3F3AP84243 136 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 PMPCAQ10713 525 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 FOXD4Q12950 439 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-222ENST00000568034 DGCR6Q14129 220 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 OR7A5Q15622 319 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 FAM69AQ5T7M9 428 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 RIPPLY2Q5TAB7 128 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 ABLIM2Q6H8Q1 611 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 TTC33Q6PID6 262 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-222ENST00000568034 CLEC18BQ6UXF7 455 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 CLEC18CQ8NCF0 446 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 PAPD5Q8NDF8 572 aaKnown RBP16.08■□□□□ 0.16
COMMD4-222ENST00000568034 OR6S1Q8NH40 331 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 PFN4Q8NHR9 129 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 MFSD8Q8NHS3 518 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 SLC7A13Q8TCU3 470 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 TMEM239Q8WW34 195 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 SLC19A3Q9BZV2 496 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 RNF122Q9H9V4 155 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 TIGARQ9NQ88 270 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 VNN3Q9NY84 501 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 ING1Q9UK53 422 aaPredicted RBP16.08■□□□□ 0.16
COMMD4-222ENST00000568034 MCTS1Q9ULC4 181 aaKnown RBP16.08■□□□□ 0.16
COMMD4-222ENST00000568034 AURKCQ9UQB9 309 aa16.08■□□□□ 0.16
COMMD4-222ENST00000568034 FAM32AQ9Y421 112 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms