RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CRYZQ08257 329 aaKnown RBP13.32□□□□□ -0.28
COMMD4-221ENST00000567935 CBFBQ13951 182 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 ISXQ2M1V0 245 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 NDUFAF6Q330K2 333 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 CLEC12AQ5QGZ9 265 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 NXNL2Q5VZ03 156 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 SLC30A6Q6NXT4 461 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 ARHGAP11AQ6P4F7 1023 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 APOOLQ6UXV4 268 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 ATG4DQ86TL0 474 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-221ENST00000567935 PRR22Q8IZ63 422 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 ANKK1Q8NFD2 765 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 OR2Y1Q8NGV0 311 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 YIPF6Q96EC8 236 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 TAAR9Q96RI9 348 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 ZNF700Q9H0M5 742 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 SLC25A18Q9H1K4 315 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 FGF20Q9NP95 211 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-221ENST00000567935 ATP13A2Q9NQ11 1180 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 CMC2Q9NRP2 79 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 ERGIC3Q9Y282 383 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 ZNF337Q9Y3M9 751 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 LOXL2Q9Y4K0 774 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 NBASA2RRP1 2371 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 SPTBN1Q01082 2364 aaKnown RBP13.31□□□□□ -0.28
COMMD4-221ENST00000567935 AGRPO00253 132 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 KPNA4O00629 521 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-221ENST00000567935 SLC22A1O15245 554 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 HCRTR2O43614 444 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 NDUFB2O95178 105 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 NTN1O95631 604 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 RAB36O95755 333 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 IFNGP01579 166 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 RAB40ALP0C0E4 278 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 ADORA3P0DMS8 318 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 SFTPCP11686 197 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 P2RX1P51575 399 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 CCR4P51679 360 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 ZNF117Q03924 483 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.31□□□□□ -0.28
COMMD4-221ENST00000567935 C1DQ13901 141 aaKnown RBP13.31□□□□□ -0.28
COMMD4-221ENST00000567935 TIGD6Q17RP2 521 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 AADACL4Q5VUY2 407 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 C5orf46Q6UWT4 87 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 P2RY8Q86VZ1 359 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 MEX3DQ86XN8 651 aaKnown RBP13.31□□□□□ -0.28
COMMD4-221ENST00000567935 GATSQ8NAP1 163 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 OR13C2Q8NGS9 318 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 ZNF563Q8TA94 476 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 RNF138Q8WVD3 245 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 NACC2Q96BF6 587 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 MND1Q9BWT6 205 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 ADAM19Q9H013 955 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 CHCHD3Q9NX63 227 aaKnown RBP13.31□□□□□ -0.28
COMMD4-221ENST00000567935 H2AFY2Q9P0M6 372 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-221ENST00000567935 EXOSC1Q9Y3B2 195 aaKnown RBP13.31□□□□□ -0.28
COMMD4-221ENST00000567935 PCDHGA3Q9Y5H0 932 aa13.31□□□□□ -0.28
COMMD4-221ENST00000567935 CACNA1DQ01668 2161 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 CDC14CA4D256 554 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 RIIAD1A6NNX1 92 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 IDH3BO43837 385 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 OR7A10O76100 309 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 NADKO95544 446 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-221ENST00000567935 PEPDP12955 493 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 MYL12AP19105 171 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 PAICSP22234 425 aaKnown RBP13.3□□□□□ -0.28
COMMD4-221ENST00000567935 PAX7P23759 505 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 HTR1FP30939 366 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 FOLR3P41439 243 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 HTR3AP46098 478 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 MTNR1AP48039 350 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 CDH11P55287 796 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 PRPS1P60891 318 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 C17orf67Q0P5P2 114 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 PCOLCEQ15113 449 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 TBR1Q16650 682 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 TIMM50Q3ZCQ8 353 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 LCN10Q6JVE6 187 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 RAB11FIP2Q7L804 512 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 DND1Q8IYX4 353 aaKnown RBP13.3□□□□□ -0.28
COMMD4-221ENST00000567935 B4GALNT2Q8NHY0 566 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 M1APQ8TC57 530 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 ELP5Q8TE02 316 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 TMEM234Q8WY98 164 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 HGDQ93099 445 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 IFT27Q9BW83 186 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 DEFB126Q9BYW3 111 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 MMP25Q9NPA2 562 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 TIMMDC1Q9NPL8 285 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 SDHAF3Q9NRP4 125 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 MYOTQ9UBF9 498 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 PADI1Q9ULC6 663 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 SLC6A5Q9Y345 797 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 PTRH2Q9Y3E5 179 aaKnown RBP13.3□□□□□ -0.28
COMMD4-221ENST00000567935 EXPH5Q8NEV8 1989 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 ITPR2Q14571 2701 aa13.3□□□□□ -0.28
COMMD4-221ENST00000567935 CCDC187A0A096LP49 1063 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 IGHV1-45A0A0A0MS14 117 aa13.29□□□□□ -0.28
COMMD4-221ENST00000567935 PLD2O14939 933 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms