RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SLC17A1Q14916 467 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 ADIPOQQ15848 244 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 BHLHB9Q6PI77 547 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 ANKRD46Q86W74 232 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 MEX3DQ86XN8 651 aaKnown RBP13.47□□□□□ -0.25
PALB2-205ENST00000567003 IFT20Q8IY31 132 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 ZCCHC24Q8N2G6 241 aaKnown RBP13.47□□□□□ -0.25
PALB2-205ENST00000567003 RFLNBQ8N5W9 214 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 ZIC4Q8N9L1 334 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 OR4A15Q8NGL6 344 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 XAGE5Q8WWM1 108 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 SLC38A2Q96QD8 506 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 PRPF18Q99633 342 aaKnown RBP13.47□□□□□ -0.25
PALB2-205ENST00000567003 OSGIN1Q9UJX0 560 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 PRAMEF27A3QJZ7 478 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 DUXAA6NLW8 204 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 NR5A2O00482 541 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 NPHS1O60500 1241 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 STAMBPO95630 424 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 LGI1O95970 557 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 PRPS1L1P21108 318 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 CFPP27918 469 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 CALCRP30988 508 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 SLC35A1P78382 337 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 TGFBR3Q03167 851 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 TBRG1Q3YBR2 411 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 OTUD3Q5T2D3 398 aaPredicted RBP13.46□□□□□ -0.25
PALB2-205ENST00000567003 RINLQ6ZS11 566 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 AAED1Q7RTV5 226 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 MYPOPQ86VE0 399 aaPredicted RBP13.46□□□□□ -0.25
PALB2-205ENST00000567003 ARFGAP2Q8N6H7 521 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 NATD1Q8N6N6 113 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 TMEM99Q8N816 258 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 ROPN1LQ96C74 230 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 AURKBQ96GD4 344 aaPredicted RBP13.46□□□□□ -0.25
PALB2-205ENST00000567003 SNX18Q96RF0 628 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 KCNS3Q9BQ31 491 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 RHOXF2Q9BQY4 288 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 NAA11Q9BSU3 229 aaPredicted RBP13.46□□□□□ -0.25
PALB2-205ENST00000567003 EXD2Q9NVH0 621 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 PARPBPQ9NWS1 579 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 ZDHHC2Q9UIJ5 367 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 MID2Q9UJV3 735 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 TRAPPC4Q9Y296 219 aa13.46□□□□□ -0.25
PALB2-205ENST00000567003 MGAM2Q2M2H8 2515 aa13.46□□□□□ -0.26
PALB2-205ENST00000567003 B9A039 149 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 LILRA1O75019 489 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 AKR7A3O95154 331 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 CPSF4O95639 269 aaKnown RBP13.45□□□□□ -0.26
PALB2-205ENST00000567003 APEX1P27695 318 aaKnown RBP13.45□□□□□ -0.26
PALB2-205ENST00000567003 TACR3P29371 465 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 CLK1P49759 484 aaKnown RBP13.45□□□□□ -0.26
PALB2-205ENST00000567003 POLR2HP52434 150 aaKnown RBP13.45□□□□□ -0.26
PALB2-205ENST00000567003 KCNJ10P78508 379 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 TRIP10Q15642 601 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 ZSWIM7Q19AV6 140 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 GPAT3Q53EU6 434 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 ATAD3BQ5T9A4 648 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 C12orf54Q6X4T0 127 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 LINGO2Q7L985 606 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 OR9K2Q8NGE7 335 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 OR1K1Q8NGR3 316 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 UBLCP1Q8WVY7 318 aaPredicted RBP13.45□□□□□ -0.26
PALB2-205ENST00000567003 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 TUBGCP3Q96CW5 907 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 DDIT4LQ96D03 193 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 ALKBH3Q96Q83 286 aaPredicted RBP13.45□□□□□ -0.26
PALB2-205ENST00000567003 PLK3Q9H4B4 646 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 MYOZ1Q9NP98 299 aaPredicted RBP13.45□□□□□ -0.26
PALB2-205ENST00000567003 SLC17A7Q9P2U7 560 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 TMEFF2Q9UIK5 374 aaPredicted RBP13.45□□□□□ -0.26
PALB2-205ENST00000567003 PCDHGB4Q9UN71 923 aa13.45□□□□□ -0.26
PALB2-205ENST00000567003 A0A096LPE4 126 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 A0A1W2PPZ6 126 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 LYNX1G3V0Z9 82 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 EIF1BO60739 113 aaKnown RBP13.44□□□□□ -0.26
PALB2-205ENST00000567003 VENTXO95231 258 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 CELA3BP08861 270 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 CECR9P0C854 216 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 LYNX1P0DP58 116 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 DAOP14920 347 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 IDH3GP51553 393 aaPredicted RBP13.44□□□□□ -0.26
PALB2-205ENST00000567003 NAAAQ02083 359 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 CEACAM7Q14002 265 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 CCNIQ14094 377 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 OR7A5Q15622 319 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 PAQR6Q6TCH4 344 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 GPAT4Q86UL3 456 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 SVOPLQ8N434 492 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 MIPOL1Q8TD10 442 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 PPP1R36Q96LQ0 422 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 ADAM19Q9H013 955 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 SAP130Q9H0E3 1048 aa13.44□□□□□ -0.26
PALB2-205ENST00000567003 EXOSC3Q9NQT5 275 aaKnown RBP13.44□□□□□ -0.26
PALB2-205ENST00000567003 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.44□□□□□ -0.26
PALB2-205ENST00000567003 hCG_2039718K7EN88 272 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 ZNF208O43345 1280 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 RGS9O75916 674 aaPredicted RBP13.43□□□□□ -0.26
PALB2-205ENST00000567003 KRT33AO76009 404 aa13.43□□□□□ -0.26
PALB2-205ENST00000567003 CRYAAP02489 173 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms