RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 RSPO3Q9BXY4 272 aaPredicted RBP11.19□□□□□ -0.62
LPCAT4-206ENST00000566581 IKZF5Q9H5V7 419 aa11.19□□□□□ -0.62
LPCAT4-206ENST00000566581 PIF1Q9H611 641 aa11.19□□□□□ -0.62
LPCAT4-206ENST00000566581 NGBQ9NPG2 151 aa11.19□□□□□ -0.62
LPCAT4-206ENST00000566581 BEX4Q9NWD9 120 aaPredicted RBP11.19□□□□□ -0.62
LPCAT4-206ENST00000566581 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.19□□□□□ -0.62
LPCAT4-206ENST00000566581 NOSIPQ9Y314 301 aaKnown RBP11.19□□□□□ -0.62
LPCAT4-206ENST00000566581 ZANQ9Y493 2812 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 ZFHX3Q15911 3703 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 LIPT2A6NK58 231 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 RAMP1O60894 148 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 NPIPB7O75200 414 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 MRPL33O75394 65 aaKnown RBP11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 COX5AP20674 150 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 EDNRAP25101 427 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 NTF4P34130 210 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 IDUAP35475 653 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 SLC17A1Q14916 467 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 TAB1Q15750 504 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 ACKR1Q16570 336 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 FBXW9Q5XUX1 488 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 BHLHA15Q7RTS1 189 aaPredicted RBP11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 ATG4DQ86TL0 474 aaPredicted RBP11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 TGIF2LYQ8IUE0 185 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 CADM2Q8N3J6 435 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 LSMEM1Q8N8F7 131 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 BHLHE22Q8NFJ8 381 aaPredicted RBP11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 STK35Q8TDR2 534 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 PIGTQ969N2 578 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 C3orf49Q96BT1 292 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 ANKRD27Q96NW4 1050 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 HS3ST6Q96QI5 342 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 ZNF607Q96SK3 696 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 CGREF1Q99674 301 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 CPPED1Q9BRF8 314 aaPredicted RBP11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 TMEM204Q9BSN7 226 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 EVA1AQ9H8M9 152 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 C12orf10Q9HB07 376 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 PARPBPQ9NWS1 579 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 PRSS50Q9UI38 385 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 CSPG4Q6UVK1 2322 aa11.18□□□□□ -0.62
LPCAT4-206ENST00000566581 PRORSD1PA6NEY8 169 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 TMEM229AB2RXF0 380 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 ANGPT2O15123 496 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 SERPINB7O75635 380 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 TROVE2P10155 538 aaKnown RBP eCLIP11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 IGHV1-2P23083 117 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 RBBP4Q09028 425 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 CEACAM7Q14002 265 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 SCARB2Q14108 478 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 C6orf89Q6UWU4 347 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 C20orf204Q6ZNR8 217 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 DHDDSQ86SQ9 333 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 RETREG3Q86VR2 466 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 WFDC8Q8IUA0 241 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 ZNF433Q8N7K0 673 aaPredicted RBP11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 HIPK4Q8NE63 616 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 APH1AQ96BI3 265 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 DNAJA3Q96EY1 480 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 PLPPR2Q96GM1 343 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 SF3B5Q9BWJ5 86 aaKnown RBP11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 MALT1Q9UDY8 824 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 SLC9A8Q9Y2E8 581 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 FLVCR1Q9Y5Y0 555 aa11.17□□□□□ -0.62
LPCAT4-206ENST00000566581 AQP7P3A6NL99 342 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 TPST1O60507 370 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 FZD7O75084 574 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 LYZL6O75951 148 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 MFN2O95140 757 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 VAMP5O95183 116 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 ADSLP30566 484 aaPredicted RBP11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 HOXC12P31275 282 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 PCBP3P57721 371 aaKnown RBP11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 ADAM8P78325 824 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 BNIP2Q12982 314 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 OR7A5Q15622 319 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 TSC22D1Q15714 1073 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 TIMM23BQ5SRD1 257 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 NCMAPQ5T1S8 102 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 OTUD3Q5T2D3 398 aaPredicted RBP11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 C1QTNF12Q5T7M4 302 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 C1orf140Q5VVS0 124 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 ADAM5Q6NVV9 412 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 C5orf46Q6UWT4 87 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 SEZ6L2Q6UXD5 910 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 NET1Q7Z628 596 aaPredicted RBP11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 PTOV1Q86YD1 416 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 TMEM99Q8N816 258 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 C11orf65Q8NCR3 313 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 MFSD8Q8NHS3 518 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 DNAJA4Q8WW22 397 aaPredicted RBP11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 IGFBPL1Q8WX77 278 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 TMEM45BQ96B21 275 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 TAPBPLQ9BX59 468 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 TMEM120AQ9BXJ8 343 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 TRIM2Q9C040 744 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 CCDC134Q9H6E4 229 aa11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 ESRP2Q9H6T0 727 aaKnown RBP11.16□□□□□ -0.62
LPCAT4-206ENST00000566581 KAT8Q9H7Z6 458 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms