RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 FBP2O00757 339 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 MRASO14807 208 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 FRS3O43559 492 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 AHSA1O95433 338 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 PNMTP11086 282 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 KLK2P20151 261 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 PCBP3P57721 371 aaKnown RBP17.61■□□□□ 0.41
CMTM3-211ENST00000565922 SF3A3Q12874 501 aaKnown RBP eCLIP17.61■□□□□ 0.41
CMTM3-211ENST00000565922 CEACAM7Q14002 265 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 CAPRIN1Q14444 709 aaKnown RBP17.61■□□□□ 0.41
CMTM3-211ENST00000565922 ELOA3BQ3SY89 546 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 BEX5Q5H9J7 111 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 FAM91A1Q658Y4 838 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 REP15Q6BDI9 236 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 PAMR1Q6UXH9 720 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 SSX8Q7RTT4 187 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 PATL1Q86TB9 770 aaKnown RBP17.61■□□□□ 0.41
CMTM3-211ENST00000565922 RANBP3LQ86VV4 465 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-211ENST00000565922 PTOV1Q86YD1 416 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 ELOA3Q8NG57 546 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 OR8J3Q8NGG0 315 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 OR52E4Q8NGH9 312 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 RASSF5Q8WWW0 418 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 NRGNQ92686 78 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 KISS1RQ969F8 398 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-211ENST00000565922 APH1AQ96BI3 265 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 LRRC58Q96CX6 371 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 PIK3IP1Q96FE7 263 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 ZNF317Q96PQ6 595 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-211ENST00000565922 NGBQ9NPG2 151 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 PARPBPQ9NWS1 579 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 GID8Q9NWU2 228 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 AKAP6Q13023 2319 aa17.61■□□□□ 0.41
CMTM3-211ENST00000565922 CCDC168Q8NDH2 2452 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 LIPT2A6NK58 231 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 DEFB108AA8MXU0 73 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 TMEM229AB2RXF0 380 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 CCDC22O60826 627 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 MRPL33O75394 65 aaKnown RBP17.6■□□□□ 0.41
CMTM3-211ENST00000565922 MFN2O95140 757 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 ADAP00813 363 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 RAF1P04049 648 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 GTF2E2P29084 291 aaKnown RBP17.6■□□□□ 0.41
CMTM3-211ENST00000565922 PCGF2P35227 344 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 NR1H2P55055 460 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 SELPLGQ14242 412 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 OR7A5Q15622 319 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 OTUD3Q5T2D3 398 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-211ENST00000565922 C1orf140Q5VVS0 124 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 NANOGP8Q6NSW7 305 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 ULK3Q6PHR2 472 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 C6orf89Q6UWU4 347 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 SNX32Q86XE0 403 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 OR10A6Q8NH74 314 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 C10orf82Q8WW14 230 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 ZNF775Q96BV0 537 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-211ENST00000565922 ECSITQ9BQ95 431 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 SF3B5Q9BWJ5 86 aaKnown RBP17.6■□□□□ 0.41
CMTM3-211ENST00000565922 PIF1Q9H611 641 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 PLEKHF2Q9H8W4 249 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 NANOGQ9H9S0 305 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 TMEM27Q9HBJ8 222 aa17.6■□□□□ 0.41
CMTM3-211ENST00000565922 HRNRQ86YZ3 2850 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-211ENST00000565922 ZNF814B7Z6K7 855 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 TPST1O60507 370 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 VAMP5O95183 116 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 C8BP07358 591 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 IST1P53990 364 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 HOXC5Q00444 222 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 BNIP2Q12982 314 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 KEAP1Q14145 624 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 ALG10BQ5I7T1 473 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 FBXW9Q5XUX1 488 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 CCDC103Q8IW40 242 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 SLC26A7Q8TE54 656 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 S100PBPQ96BU1 408 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 SLC47A1Q96FL8 570 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 PRSS50Q9UI38 385 aa17.59■□□□□ 0.41
CMTM3-211ENST00000565922 A0A1B0GWA3 101 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 AQP7P3A6NL99 342 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 M0QX08 132 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 OR2T1O43869 369 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 NPIPB7O75200 414 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 THBDP07204 575 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 COX5AP20674 150 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 ART1P52961 327 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 DMTNQ08495 405 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 SLC17A1Q14916 467 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 VMACQ2NL98 169 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 GLIPR1L2Q4G1C9 344 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 TMEM225Q6GV28 225 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 ERICH5Q6P6B1 374 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 BHLHA15Q7RTS1 189 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-211ENST00000565922 WFDC8Q8IUA0 241 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 UBE2J2Q8N2K1 259 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 MFSD8Q8NHS3 518 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 HSD17B8Q92506 261 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 SLC38A4Q969I6 547 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 FOXC2Q99958 501 aa17.58■□□□□ 0.4
CMTM3-211ENST00000565922 NSRP1Q9H0G5 558 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms