RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CERS6Q6ZMG9 384 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TMPRSS11FQ6ZWK6 438 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 SNX20Q7Z614 316 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 CENPVQ7Z7K6 275 aaPredicted RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 P2RY8Q86VZ1 359 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 MICU2Q8IYU8 434 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF683Q8IZ20 524 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 OFCC1Q8IZS5 231 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ARL10Q8N8L6 244 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 FNDC5Q8NAU1 212 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 KBTBD8Q8NFY9 601 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 GANCQ8TET4 914 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 RASSF5Q8WWW0 418 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ACTR8Q9H981 624 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 PRSS16Q9NQE7 514 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 PLCXD1Q9NUJ7 323 aa3.78□□□□□ -1.8
LINC00561-201ENST00000565815 DCAF13Q9NV06 445 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 RCC2Q9P258 522 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TRMT6Q9UJA5 497 aaKnown RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 TMEM184BQ9Y519 407 aaPredicted RBP3.78□□□□□ -1.8
LINC00561-201ENST00000565815 ACACAQ13085 2346 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 A0A096LPI6 279 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 C2orf81A6NN90 581 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 A8MXE2 369 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 LOC110117498-PIK3R3F6TDL0 507 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PRMT5O14744 637 aaPredicted RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ZNHIT1O43257 154 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 XPNPEP2O43895 674 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 OR10H2O60403 315 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 TPST1O60507 370 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PRAMEF11O60813 436 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ANGPTL1O95841 491 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 GOT2P00505 430 aaKnown RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 LINC00032P0C843 101 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PRPS2P11908 318 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 RPS3P23396 243 aaKnown RBP eCLIP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SHMT2P34897 504 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 OPRL1P41146 370 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ETV6P41212 452 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 CD86P42081 329 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF140P52738 457 aaPredicted RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PLK1P53350 603 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 COPZ1P61923 177 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ZXDBP98169 803 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PLIN5Q00G26 463 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 CD47Q08722 323 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 CAPRIN1Q14444 709 aaKnown RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 OR4D1Q15615 310 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 RBBP7Q16576 425 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 TIMM50Q3ZCQ8 353 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PAGE3Q5JUK9 113 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 GCNT6Q5T4J0 391 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 UBE2UQ5VVX9 321 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 CALHM3Q86XJ0 350 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 LMNTD1Q8N9Z9 388 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 BPIFB6Q8NFQ5 453 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 RHOXF1Q8NHV9 184 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 C9orf43Q8TAL5 461 aaPredicted RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SETD6Q8TBK2 473 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 DYNC2LI1Q8TCX1 351 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 C17orf50Q8WW18 174 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SLC13A3Q8WWT9 602 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PIK3R3Q92569 461 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 NDRG1Q92597 394 aaKnown RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 FAM162AQ96A26 154 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 NSMCE3Q96MG7 304 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF300Q96RE9 604 aaPredicted RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 MBOAT4Q96T53 435 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PITX2Q99697 317 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PIGQQ9BRB3 760 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SLC39A3Q9BRY0 314 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 NAA11Q9BSU3 229 aaPredicted RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 NXF2Q9GZY0 626 aaKnown RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 IL1RL2Q9HB29 575 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 NT5MQ9NPB1 228 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 FBXL12Q9NXK8 326 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 STOML2Q9UJZ1 356 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 GRIP1Q9Y3R0 1128 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ATP6AP2A0A1C7CYW4 349 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 EVPLLA8MZ36 301 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 CXCR6O00574 342 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 RAD51BO15315 384 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 HCRTO43612 131 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ATP6AP2O75787 350 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 UPK1BO75841 260 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 TNFSF15O95150 251 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 APOA1P02647 267 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 PPIBP23284 216 aaKnown RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ELK4P28324 431 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 POLR2IP36954 125 aaKnown RBP3.77□□□□□ -1.81
LINC00561-201ENST00000565815 DCTP40126 519 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 GSSP48637 474 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 TRPC1P48995 793 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 RGS4P49798 205 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 OR4D2P58180 307 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SLC35A2P78381 396 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 GNA12Q03113 381 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF235Q14590 738 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 SPCS2Q15005 226 aa3.77□□□□□ -1.81
LINC00561-201ENST00000565815 KIAA0040Q15053 153 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms