RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 UCK2Q9BZX2 261 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 PAPOLBQ9NRJ5 636 aaKnown RBP10.03□□□□□ -0.8
SF3B3-205ENST00000564899 KRT84Q9NSB2 600 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 SMPD3Q9NY59 655 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-205ENST00000564899 B4GALT7Q9UBV7 327 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 TMEM5Q9Y2B1 443 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 POFUT2Q9Y2G5 429 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 TMED7Q9Y3B3 224 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 CSAG2Q9Y5P2 127 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 TMEM72A0PK05 275 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 C7orf72A4D263 438 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 SUSD5O60279 629 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 SNAP29O95721 258 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 FPR3P25089 353 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 APOBEC1P41238 236 aaKnown RBP10.02□□□□□ -0.81
SF3B3-205ENST00000564899 GPR4P46093 362 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 OMPP47874 163 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 PLGLB1Q02325 96 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 PRKCDQ05655 676 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 MRPL49Q13405 166 aaKnown RBP10.02□□□□□ -0.81
SF3B3-205ENST00000564899 TOMM20Q15388 145 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 ZIK1Q3SY52 487 aaPredicted RBP10.02□□□□□ -0.81
SF3B3-205ENST00000564899 NADK2Q4G0N4 442 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 RAET1LQ5VY80 246 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 ASB18Q6ZVZ8 466 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 MEX3DQ86XN8 651 aaKnown RBP10.02□□□□□ -0.81
SF3B3-205ENST00000564899 ADGRG3Q86Y34 549 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 TEX19Q8NA77 164 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 POC1BQ8TC44 478 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 NPAS1Q99742 590 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 TTTY12Q9BZ98 90 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 RIBC2Q9H4K1 309 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 MEPEQ9NQ76 525 aaPredicted RBP10.02□□□□□ -0.81
SF3B3-205ENST00000564899 SERINC1Q9NRX5 453 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 C20orf141Q9NUB4 165 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 LUZP4Q9P127 313 aa10.02□□□□□ -0.81
SF3B3-205ENST00000564899 RPH3AQ9Y2J0 694 aaPredicted RBP10.02□□□□□ -0.81
SF3B3-205ENST00000564899 DLGAP1O14490 977 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 KLF4O43474 513 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 TRAPPC6AO75865 159 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 RFPL3SP0C7P2 107 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF17P17021 662 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 GSTM3P21266 225 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 GDF1P27539 372 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 ADH6P28332 368 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 RFC3P40938 356 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 GSSP48637 474 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 CTBP2P56545 445 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 TSPAN31Q12999 210 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 EIF2S3LQ2VIR3 472 aaKnown RBP10.01□□□□□ -0.81
SF3B3-205ENST00000564899 KLHL17Q6TDP4 642 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 IGFL3Q6UXB1 125 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 CD300LDQ6UXZ3 194 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-205ENST00000564899 CDK20Q8IZL9 346 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 PARP8Q8N3A8 854 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 GTPBP8Q8N3Z3 284 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-205ENST00000564899 OR5M1Q8NGP8 315 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 STK35Q8TDR2 534 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 BPIFA2Q96DR5 249 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 SGTBQ96EQ0 304 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 MBOAT4Q96T53 435 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 GPA33Q99795 319 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 ADI1Q9BV57 179 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 OR2B2Q9GZK3 357 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 UBQLN3Q9H347 655 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 TOR3AQ9H497 397 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF703Q9H7S9 590 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-205ENST00000564899 CHRNA9Q9UGM1 479 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 ENOPH1Q9UHY7 261 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 PCDHGB7Q9Y5F8 929 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 SPIN1Q9Y657 262 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-205ENST00000564899 TACC2O95359 2948 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 DNHD1Q96M86 4753 aa10.01□□□□□ -0.81
SF3B3-205ENST00000564899 HIVEP1P15822 2718 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 TRAV36DV7A0A075B6V5 113 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 ZC3H12DA2A288 527 aaKnown RBP10□□□□□ -0.81
SF3B3-205ENST00000564899 HTR3EA5X5Y0 456 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 UNC119BA6NIH7 251 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 TTLL8A6PVC2 850 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 FAM166BA8MTA8 275 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 A8MVM7 634 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 EFCAB9A8MZ26 197 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 ACOT7O00154 380 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF208O43345 1280 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 ZIC3O60481 467 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 GLSO94925 669 aaPredicted RBP10□□□□□ -0.81
SF3B3-205ENST00000564899 AHSA1O95433 338 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 CH25HO95992 272 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 IGF2P01344 180 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 SAGP10523 405 aaPredicted RBP10□□□□□ -0.81
SF3B3-205ENST00000564899 MAKP20794 623 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 ELK4P28324 431 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 MAP2K6P52564 334 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 EGR4Q05215 589 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 COX10Q12887 443 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 SELENBP1Q13228 472 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 TMEM44Q2T9K0 475 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10□□□□□ -0.81
SF3B3-205ENST00000564899 GLYR1Q49A26 553 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms