RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 THBS1P07996 1170 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 HOXB9P17482 250 aaPredicted RBP16.32■□□□□ 0.2
CLN6-204ENST00000564752 COX5AP20674 150 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 IGHV1-2P23083 117 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 CDKN1AP38936 164 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 CLK1P49759 484 aaKnown RBP16.32■□□□□ 0.2
CLN6-204ENST00000564752 ATP4BP51164 291 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 KRTAP1-1Q07627 177 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 LARS2Q15031 903 aaKnown RBP16.32■□□□□ 0.2
CLN6-204ENST00000564752 STK11Q15831 433 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 AGKQ53H12 422 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 TIMM23BQ5SRD1 257 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 LRIF1Q5T3J3 769 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 RNF220Q5VTB9 566 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 ABLIM2Q6H8Q1 611 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 SSX8Q7RTT4 187 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.32■□□□□ 0.2
CLN6-204ENST00000564752 P2RY8Q86VZ1 359 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 ADGRG3Q86Y34 549 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 ZNF100Q8IYN0 542 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 GTPBP3Q969Y2 492 aaKnown RBP16.32■□□□□ 0.2
CLN6-204ENST00000564752 DDIT4LQ96D03 193 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 MUCL1Q96DR8 90 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 DNAJA3Q96EY1 480 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 THOC1Q96FV9 657 aaKnown RBP16.32■□□□□ 0.2
CLN6-204ENST00000564752 ARL5BQ96KC2 179 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 TMEM45AQ9NWC5 275 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 TMED7Q9Y3B3 224 aa16.32■□□□□ 0.2
CLN6-204ENST00000564752 A0A0G2JPF8 293 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 A0A1W2PP18 115 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 HNRNPCL2B2RXH8 293 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 HNRNPCL3B7ZW38 293 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 RNF223E7ERA6 249 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 DNPH1O43598 174 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 HNRNPCL1O60812 293 aaKnown RBP16.31■□□□□ 0.2
CLN6-204ENST00000564752 RAMP1O60894 148 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 CD8AP01732 235 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 NUDT7P0C024 238 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 HNRNPCL4P0DMR1 293 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 GGT1P19440 569 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 TACR3P29371 465 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 SLC1A3P43003 542 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 VEZF1Q14119 521 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 ZSWIM7Q19AV6 140 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 ZNF433Q8N7K0 673 aaPredicted RBP16.31■□□□□ 0.2
CLN6-204ENST00000564752 STON2Q8WXE9 905 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 GRIP2Q9C0E4 1043 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 ARMC7Q9H6L4 198 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 A4GALTQ9NPC4 353 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 SLC25A37Q9NYZ2 338 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 CISD1Q9NZ45 108 aaKnown RBP16.31■□□□□ 0.2
CLN6-204ENST00000564752 EMC3Q9P0I2 261 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 OSGIN1Q9UJX0 560 aa16.31■□□□□ 0.2
CLN6-204ENST00000564752 RTTNQ86VV8 2226 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 TMEM72A0PK05 275 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 ZNF716A6NP11 495 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 SHISA9B4DS77 424 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 C5orf58C9J3I9 102 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 ZNF208O43345 1280 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 GKN3PP0CG01 181 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 BMP2P12643 396 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 PPIBP23284 216 aaKnown RBP16.3■□□□□ 0.2
CLN6-204ENST00000564752 OR2B6P58173 313 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 COPZ1P61923 177 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 PRAMEF8Q5VWM4 474 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 PRAMEF7Q5VXH5 474 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 FBXW9Q5XUX1 488 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 MSRB3Q8IXL7 192 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 CADM2Q8N3J6 435 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 BBS10Q8TAM1 723 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 PIGXQ8TBF5 258 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 MAL2Q969L2 176 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 TRAF4Q9BUZ4 470 aaPredicted RBP16.3■□□□□ 0.2
CLN6-204ENST00000564752 SPATA9Q9BWV2 254 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 REG4Q9BYZ8 158 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 SLCO5A1Q9H2Y9 848 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 RABEP2Q9H5N1 569 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 NPHS2Q9NP85 383 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 NPAP1Q9NZP6 1156 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 TMEM181Q9P2C4 612 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 DCTN4Q9UJW0 460 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 ADAM21Q9UKJ8 722 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 ZNF232Q9UNY5 417 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 IFT52Q9Y366 437 aa16.3■□□□□ 0.2
CLN6-204ENST00000564752 OR5H1A6NKK0 313 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 EDF1O60869 148 aaKnown RBP16.29■□□□□ 0.2
CLN6-204ENST00000564752 IGHV4-39P01824 125 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 NCF2P19878 526 aaPredicted RBP16.29■□□□□ 0.2
CLN6-204ENST00000564752 NTF4P34130 210 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 ACVR1BP36896 505 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 MAP2K6P52564 334 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 FAPQ12884 760 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 ZNF311Q5JNZ3 666 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 PAGE3Q5JUK9 113 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 GCNT6Q5T4J0 391 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 DNM1P46Q6ZS02 220 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 DTX2Q86UW9 622 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 MAPK1IP1LQ8NDC0 245 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 SIKE1Q9BRV8 207 aa16.29■□□□□ 0.2
CLN6-204ENST00000564752 BCL2L10Q9HD36 194 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms