RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ZFP1Q6P2D0 407 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 FUT10Q6P4F1 479 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 CCBE1Q6UXH8 406 aaPredicted RBP3.18□□□□□ -1.9
CHD9-212ENST00000564641 ISLR2Q6UXK2 745 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 B3GLCTQ6Y288 498 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 C1orf186Q6ZWK4 172 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 ZNF571Q7Z3V5 609 aaPredicted RBP3.18□□□□□ -1.9
CHD9-212ENST00000564641 SETD3Q86TU7 594 aaPredicted RBP3.18□□□□□ -1.9
CHD9-212ENST00000564641 GPBP1Q86WP2 473 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 KRTAP11-1Q8IUC1 163 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 GPR65Q8IYL9 337 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 C4orf33Q8N1A6 199 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 BATF2Q8N1L9 274 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 KDM8Q8N371 416 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 FBXW8Q8N3Y1 598 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 PRSS35Q8N3Z0 413 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 LINC00469Q8N7U9 141 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 TMEM99Q8N816 258 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 TCEANCQ8N8B7 351 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 PRELID2Q8N945 189 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 ASCC1Q8N9N2 400 aaKnown RBP3.18□□□□□ -1.9
CHD9-212ENST00000564641 COLGALT1Q8NBJ5 622 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 KLHL30-AS1Q8NEE0 82 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 S100ZQ8WXG8 99 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 ISOC1Q96CN7 298 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 CMTM5Q96DZ9 223 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 C14orf79Q96F83 325 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 RMND5BQ96G75 393 aaPredicted RBP3.18□□□□□ -1.9
CHD9-212ENST00000564641 CEP19Q96LK0 163 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 MTMR9Q96QG7 549 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 PLIN2Q99541 437 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 SERPINI1Q99574 410 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 RIT2Q99578 217 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 ACPTQ9BZG2 426 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 WWP1Q9H0M0 922 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 ABCG4Q9H172 646 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 GOLPH3Q9H4A6 298 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 SP140LQ9H930 580 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 CXorf21Q9HAI6 301 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 LY9Q9HBG7 655 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 SYTL2Q9HCH5 934 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 HMG20AQ9NP66 347 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.18□□□□□ -1.9
CHD9-212ENST00000564641 FARSBQ9NSD9 589 aaKnown RBP3.18□□□□□ -1.9
CHD9-212ENST00000564641 DCAF16Q9NXF7 216 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 GDAP2Q9NXN4 497 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 UBQLN2Q9UHD9 624 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 RUVBL2Q9Y230 463 aaKnown RBP3.18□□□□□ -1.9
CHD9-212ENST00000564641 CAB39Q9Y376 341 aaPredicted RBP3.18□□□□□ -1.9
CHD9-212ENST00000564641 UBIAD1Q9Y5Z9 338 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 CPQQ9Y646 472 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 PTPRSQ13332 1948 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 ZFHX2Q9C0A1 2572 aaPredicted RBP3.18□□□□□ -1.9
CHD9-212ENST00000564641 TECTAO75443 2155 aa3.18□□□□□ -1.9
CHD9-212ENST00000564641 SPTBN4Q9H254 2564 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 HCFC1P51610 2035 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 LOXHD1Q8IVV2 1947 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 C5orf42Q9H799 3197 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 TRAV18A0A075B6X5 111 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 hCG_38984A0A1B0GV85 526 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 C2orf92A0A1B0GVN3 265 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 PCP4L1A6NKN8 68 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 ARHGEF33A8MVX0 844 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 FAM25AB3EWG3 89 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 FAM25CB3EWG5 89 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 FAM25GB3EWG6 89 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 CLDN25C9JDP6 229 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 ANKRD63C9JTQ0 380 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 H0YJX3 145 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 I3L4J1 428 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 TM9SF1O15321 606 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 CLOCKO15516 846 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 SPOPO43791 374 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 SSX5O60225 188 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 NOL4O94818 638 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 MFN2O95140 757 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 CXCL14O95715 111 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 IL1BP01584 269 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 SLC4A1P02730 911 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 S100A6P06703 90 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 SBK2P0C263 348 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 AREGP15514 252 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 ARF4P18085 180 aaPredicted RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 CFL1P23528 166 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 RRM2P31350 389 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 EVI2BP34910 448 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 CBX5P45973 191 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 NDUFV3P56181 108 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 PEX3P56589 373 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 OR1D5P58170 312 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 NLRP11P59045 1033 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 COPZ1P61923 177 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 RPP38P78345 283 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 OTUD4Q01804 1114 aaKnown RBP3.17□□□□□ -1.9
CHD9-212ENST00000564641 GNA12Q03113 381 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 RAD51Q06609 339 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 SLC3A1Q07837 685 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 MGAT3Q09327 533 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 TFDP1Q14186 410 aa3.17□□□□□ -1.9
CHD9-212ENST00000564641 SELPLGQ14242 412 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms