RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 C10orf82Q8WW14 230 aa12.15□□□□□ -0.46
CNOT1-206ENST00000564557 DNAJA4Q8WW22 397 aaPredicted RBP12.15□□□□□ -0.46
CNOT1-206ENST00000564557 ZNF317Q96PQ6 595 aaPredicted RBP12.15□□□□□ -0.46
CNOT1-206ENST00000564557 ZNF300Q96RE9 604 aaPredicted RBP12.15□□□□□ -0.46
CNOT1-206ENST00000564557 FAM107BQ9H098 131 aa12.15□□□□□ -0.46
CNOT1-206ENST00000564557 PIF1Q9H611 641 aa12.15□□□□□ -0.46
CNOT1-206ENST00000564557 KAT8Q9H7Z6 458 aaKnown RBP12.15□□□□□ -0.46
CNOT1-206ENST00000564557 NANOGQ9H9S0 305 aa12.15□□□□□ -0.46
CNOT1-206ENST00000564557 CHST2Q9Y4C5 530 aa12.15□□□□□ -0.46
CNOT1-206ENST00000564557 ITPR2Q14571 2701 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 ADGRG4Q8IZF6 3080 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 ZC3H12DA2A288 527 aaKnown RBP12.14□□□□□ -0.47
CNOT1-206ENST00000564557 MRPL33O75394 65 aaKnown RBP12.14□□□□□ -0.47
CNOT1-206ENST00000564557 ADAP00813 363 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 PNMTP11086 282 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 IMPDH2P12268 514 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 OR3A2P47893 321 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 P2RY6Q15077 328 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 OTUD3Q5T2D3 398 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-206ENST00000564557 C1orf140Q5VVS0 124 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 TMEM225Q6GV28 225 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 ALKBH2Q6NS38 261 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 PAQR6Q6TCH4 344 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 STAC2Q6ZMT1 411 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 SPATA21Q7Z572 469 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 CXorf67Q86X51 503 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-206ENST00000564557 PTOV1Q86YD1 416 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 CCDC103Q8IW40 242 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 SMYD1Q8NB12 490 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 OR8J3Q8NGG0 315 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 RP9Q8TA86 221 aaKnown RBP12.14□□□□□ -0.47
CNOT1-206ENST00000564557 STK35Q8TDR2 534 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 RASSF5Q8WWW0 418 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 KISS1RQ969F8 398 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-206ENST00000564557 APH1AQ96BI3 265 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 C3orf49Q96BT1 292 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 ELAC2Q9BQ52 826 aaKnown RBP12.14□□□□□ -0.47
CNOT1-206ENST00000564557 USB1Q9BQ65 265 aaKnown RBP12.14□□□□□ -0.47
CNOT1-206ENST00000564557 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 PARPBPQ9NWS1 579 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 ADPRHL2Q9NX46 363 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 C6orf203Q9P0P8 240 aaPredicted RBP12.14□□□□□ -0.47
CNOT1-206ENST00000564557 ARMCX1Q9P291 453 aa12.14□□□□□ -0.47
CNOT1-206ENST00000564557 TESQ9UGI8 421 aaKnown RBP12.14□□□□□ -0.47
CNOT1-206ENST00000564557 ANKHD1Q8IWZ3 2542 aaKnown RBP12.13□□□□□ -0.47
CNOT1-206ENST00000564557 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 FAM221AA4D161 298 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 TPST1O60507 370 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 MFN2O95140 757 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 OPN1SWP03999 348 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 KLK2P20151 261 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 PSMB1P20618 241 aaKnown RBP12.13□□□□□ -0.47
CNOT1-206ENST00000564557 DNASE1P24855 282 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 PCGF2P35227 344 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 ITGADQ13349 1161 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 VMACQ2NL98 169 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 ALG10BQ5I7T1 473 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 ABLIM2Q6H8Q1 611 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 ERICH5Q6P6B1 374 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 ULK3Q6PHR2 472 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 C5orf46Q6UWT4 87 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 GPAT4Q86UL3 456 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 WFDC8Q8IUA0 241 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 LSMEM1Q8N8F7 131 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 SLC25A36Q96CQ1 311 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 PIK3IP1Q96FE7 263 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 SLC47A1Q96FL8 570 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 OR10A4Q9H209 315 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 C12orf10Q9HB07 376 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 NGBQ9NPG2 151 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 SLC9A8Q9Y2E8 581 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 AP3M1Q9Y2T2 418 aa12.13□□□□□ -0.47
CNOT1-206ENST00000564557 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 A0A1B0GWA3 101 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 LIPT2A6NK58 231 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 AIM2O14862 343 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 OR2T1O43869 369 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 AKR7A3O95154 331 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 VAMP5O95183 116 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 IFNA14P01570 189 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 HRGP04196 525 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 C8BP07358 591 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 CRYGSP22914 178 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 DNAJA1P31689 397 aaKnown RBP12.12□□□□□ -0.47
CNOT1-206ENST00000564557 SLC16A1P53985 500 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 PCBP3P57721 371 aaKnown RBP12.12□□□□□ -0.47
CNOT1-206ENST00000564557 DMTNQ08495 405 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 KEAP1Q14145 624 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 GLIPR1L2Q4G1C9 344 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 RABL3Q5HYI8 236 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 FAM91A1Q658Y4 838 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 CASP12Q6UXS9 341 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 Q6ZT83 130 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 BHLHA15Q7RTS1 189 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-206ENST00000564557 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.12□□□□□ -0.47
CNOT1-206ENST00000564557 NET1Q7Z628 596 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-206ENST00000564557 ARPINQ7Z6K5 226 aa12.12□□□□□ -0.47
CNOT1-206ENST00000564557 ATG4DQ86TL0 474 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-206ENST00000564557 POU5F2Q8N7G0 328 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms