RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 HIPK4Q8NE63 616 aa13.13□□□□□ -0.31
SNX29-203ENST00000564111 TMEM171Q8WVE6 324 aa13.13□□□□□ -0.31
SNX29-203ENST00000564111 DNAJA4Q8WW22 397 aaPredicted RBP13.13□□□□□ -0.31
SNX29-203ENST00000564111 ZNF524Q96C55 264 aa13.13□□□□□ -0.31
SNX29-203ENST00000564111 AURKBQ96GD4 344 aaPredicted RBP13.13□□□□□ -0.31
SNX29-203ENST00000564111 PLPPR2Q96GM1 343 aa13.13□□□□□ -0.31
SNX29-203ENST00000564111 ZNF300Q96RE9 604 aaPredicted RBP13.13□□□□□ -0.31
SNX29-203ENST00000564111 MALT1Q9UDY8 824 aa13.13□□□□□ -0.31
SNX29-203ENST00000564111 DCHS2Q6V1P9 2916 aa13.13□□□□□ -0.31
SNX29-203ENST00000564111 TRBV5-3A0A0A0MS03 114 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 GPX2P18283 190 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 GTF2E2P29084 291 aaKnown RBP13.12□□□□□ -0.31
SNX29-203ENST00000564111 ACAA2P42765 397 aaKnown RBP13.12□□□□□ -0.31
SNX29-203ENST00000564111 MFSD13AQ14CX5 517 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 PPA1Q15181 289 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 MAPRE2Q15555 327 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 CADM2Q8N3J6 435 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 POMGNT2Q8NAT1 580 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 OR6S1Q8NH40 331 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 GTPBP3Q969Y2 492 aaKnown RBP13.12□□□□□ -0.31
SNX29-203ENST00000564111 TAS2R16Q9NYV7 291 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 AMDHD2Q9Y303 409 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 NDUFAF1Q9Y375 327 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 LIPT2A6NK58 231 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 AQP7P3A6NL99 342 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 TMEM229AB2RXF0 380 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 ZNF814B7Z6K7 855 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 AKAP8O43823 692 aaKnown RBP13.12□□□□□ -0.31
SNX29-203ENST00000564111 KLK2P20151 261 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 SCARB2Q14108 478 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 CAPRIN1Q14444 709 aaKnown RBP13.12□□□□□ -0.31
SNX29-203ENST00000564111 NCMAPQ5T1S8 102 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 OTUD3Q5T2D3 398 aaPredicted RBP13.12□□□□□ -0.31
SNX29-203ENST00000564111 FAM91A1Q658Y4 838 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 ANKRD34AQ69YU3 496 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 CASP12Q6UXS9 341 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 DHDDSQ86SQ9 333 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 UBE2J2Q8N2K1 259 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 SLC38A4Q969I6 547 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 ARL5BQ96KC2 179 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 SH3GL1Q99961 368 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 CPPED1Q9BRF8 314 aaPredicted RBP13.12□□□□□ -0.31
SNX29-203ENST00000564111 GSX2Q9BZM3 304 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 OR11A1Q9GZK7 315 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 ASB6Q9NWX5 421 aa13.12□□□□□ -0.31
SNX29-203ENST00000564111 ELOA3DA6NLF2 546 aaPredicted RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 OR2T1O43869 369 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 FZD7O75084 574 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 HOXC12P31275 282 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 NKX6-1P78426 367 aaPredicted RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 ELOA3BQ3SY89 546 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 RPS26P11Q5JNZ5 115 aaPredicted RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 SWT1Q5T5J6 900 aaKnown RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 INTS11Q5TA45 600 aaKnown RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 C1orf140Q5VVS0 124 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 NET1Q7Z628 596 aaPredicted RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 HMGN2P46Q86SG4 172 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 RANBP3LQ86VV4 465 aaPredicted RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 C11orf65Q8NCR3 313 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 ELOA3Q8NG57 546 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 MFSD8Q8NHS3 518 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 NFKBIDQ8NI38 313 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 EPYCQ99645 322 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 ZNF385DQ9H6B1 395 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 OBP2BQ9NPH6 170 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 SLC52A3Q9NQ40 469 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 FAIMQ9NVQ4 179 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 SLC25A37Q9NYZ2 338 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 UPB1Q9UBR1 384 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 PRSS50Q9UI38 385 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 PRRC2AP48634 2157 aaKnown RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 OR5H1A6NKK0 313 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 BBIP1A8MTZ0 92 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 FRS3O43559 492 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 IMPDH2P12268 514 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 CCNA2P20248 432 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 HSP90B2PQ58FF3 399 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 COQ5Q5HYK3 327 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 ATG4DQ86TL0 474 aaPredicted RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 ZNF433Q8N7K0 673 aaPredicted RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 LSMEM1Q8N8F7 131 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 RASSF5Q8WWW0 418 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 C3orf49Q96BT1 292 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 ZNF317Q96PQ6 595 aaPredicted RBP13.11□□□□□ -0.31
SNX29-203ENST00000564111 FLVCR1Q9Y5Y0 555 aa13.11□□□□□ -0.31
SNX29-203ENST00000564111 CIB4A0PJX0 185 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 NPPAP01160 153 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 C8BP07358 591 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 ADSLP30566 484 aaPredicted RBP13.1□□□□□ -0.31
SNX29-203ENST00000564111 SLC17A1Q14916 467 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 TAB1Q15750 504 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 ETFDHQ16134 617 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 RUNDC3AQ59EK9 446 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 ADPRHL1Q8NDY3 354 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 FBXW5Q969U6 566 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 BDH2Q9BUT1 245 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 AMBRA1Q9C0C7 1298 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 TMEM27Q9HBJ8 222 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 NPHS2Q9NP85 383 aa13.1□□□□□ -0.31
SNX29-203ENST00000564111 A0A1W2PPR1 153 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 355.5 ms